Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1010 |
Symbol | |
ID | 3606396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1499587 |
End bp | 1500396 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637687879 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_292203 |
Protein GI | 72382848 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGATG TAAATCAAAA TTTAAGTAAA GAAGGGTTGG CAAATTTGGC CATAGACCCT GATCTCTTGG CTCGAGAACT AGCTGCTCAG TTGGCTGGGG ATCCTTTAGA TGAAATTGAA CTAGATAAAA CTGATGAAGA TCTAGTGAAT TCATCAAAAG AGTGTGATAT TGCATTGAAA TGGCTTCAAT CTGGAAATGA AGAAAGACTT CAAGGCCTAA GAGTTTTTTG TGAACACAGA GATTCTAGAG CTCTTCCATT TTTACTCCCT TTACTTGACG AACCCTCTCC AGTTGTGAGG ATGAGCGCTG TTTATGCTTT AGGTAGAAAT CCTTGTCCCC AAGCTATTGA CCTTCTATTG CATTTATTGA GATTCGATAG TAATGCTTAT GTGCGAAAAG CTACTGCTTG GAGTCTTGGA AATTACTCAA ATGCCCCCGT TCTAGAACCT CTGATTAATG CTTTAAAACA AGATGTTGCT GCTGTTCGAC TTTGGGCATC CAGTTCTTTA GCAGAGGTTG GTCTCAATTC ATTAGAAAGC TCTTTGCCAG CAGCAAATCA ATTACTTGAA AGTTTACAAA TTGATGGGGA ACCAATAGTT AGGAGTAATT GTATTTGGTC TCTTGGTCGC CTTTACATTC ATTTGAGTGA GGAAATCAAA ATTCACATAG TAGAGGCTTT TATTTCTGTT TTATTGAATG ACCGTGAGCC TTCTGTCAGG TATGAAGCAA GGACAGCTTT GGAGCAATTG GACAATCAAG AGGTACAAAA AAAATTAAAA TCATTAATTG ATGATGGTCA ATTGGTTTAA
|
Protein sequence | MSDVNQNLSK EGLANLAIDP DLLARELAAQ LAGDPLDEIE LDKTDEDLVN SSKECDIALK WLQSGNEERL QGLRVFCEHR DSRALPFLLP LLDEPSPVVR MSAVYALGRN PCPQAIDLLL HLLRFDSNAY VRKATAWSLG NYSNAPVLEP LINALKQDVA AVRLWASSSL AEVGLNSLES SLPAANQLLE SLQIDGEPIV RSNCIWSLGR LYIHLSEEIK IHIVEAFISV LLNDREPSVR YEARTALEQL DNQEVQKKLK SLIDDGQLV
|
| |