Gene PMN2A_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1010 
Symbol 
ID3606396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1499587 
End bp1500396 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content38% 
IMG OID637687879 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_292203 
Protein GI72382848 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG TAAATCAAAA TTTAAGTAAA GAAGGGTTGG CAAATTTGGC CATAGACCCT 
GATCTCTTGG CTCGAGAACT AGCTGCTCAG TTGGCTGGGG ATCCTTTAGA TGAAATTGAA
CTAGATAAAA CTGATGAAGA TCTAGTGAAT TCATCAAAAG AGTGTGATAT TGCATTGAAA
TGGCTTCAAT CTGGAAATGA AGAAAGACTT CAAGGCCTAA GAGTTTTTTG TGAACACAGA
GATTCTAGAG CTCTTCCATT TTTACTCCCT TTACTTGACG AACCCTCTCC AGTTGTGAGG
ATGAGCGCTG TTTATGCTTT AGGTAGAAAT CCTTGTCCCC AAGCTATTGA CCTTCTATTG
CATTTATTGA GATTCGATAG TAATGCTTAT GTGCGAAAAG CTACTGCTTG GAGTCTTGGA
AATTACTCAA ATGCCCCCGT TCTAGAACCT CTGATTAATG CTTTAAAACA AGATGTTGCT
GCTGTTCGAC TTTGGGCATC CAGTTCTTTA GCAGAGGTTG GTCTCAATTC ATTAGAAAGC
TCTTTGCCAG CAGCAAATCA ATTACTTGAA AGTTTACAAA TTGATGGGGA ACCAATAGTT
AGGAGTAATT GTATTTGGTC TCTTGGTCGC CTTTACATTC ATTTGAGTGA GGAAATCAAA
ATTCACATAG TAGAGGCTTT TATTTCTGTT TTATTGAATG ACCGTGAGCC TTCTGTCAGG
TATGAAGCAA GGACAGCTTT GGAGCAATTG GACAATCAAG AGGTACAAAA AAAATTAAAA
TCATTAATTG ATGATGGTCA ATTGGTTTAA
 
Protein sequence
MSDVNQNLSK EGLANLAIDP DLLARELAAQ LAGDPLDEIE LDKTDEDLVN SSKECDIALK 
WLQSGNEERL QGLRVFCEHR DSRALPFLLP LLDEPSPVVR MSAVYALGRN PCPQAIDLLL
HLLRFDSNAY VRKATAWSLG NYSNAPVLEP LINALKQDVA AVRLWASSSL AEVGLNSLES
SLPAANQLLE SLQIDGEPIV RSNCIWSLGR LYIHLSEEIK IHIVEAFISV LLNDREPSVR
YEARTALEQL DNQEVQKKLK SLIDDGQLV