Gene PMN2A_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0990 
Symbol 
ID3606376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1481862 
End bp1483142 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content31% 
IMG OID637687859 
Productputative c-type cytochrome biogenesis protein Ccs1 
Protein accessionYP_292183 
Protein GI72382828 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1333] ResB protein required for cytochrome c biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.137792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGCCAAGT TTTAAACTGG CTTTCTAGCT TAAAAATTGC AATATTACTT 
TTATTAGTAA TAGCTGTTTC ATGCGCAGCC GGGACTTTAA TACCACAACA AGAATCAAAT
CAATTCTATT ACGATAATTT CAATAAGAAT CCTTTTCTTG GAATAATTAA TGCAAAAATA
TTACTACTTT TTGAATTCGA TCATGTTTAT ACAAGTTTTT GGTTTTTATT CTTACTTATA
TGGCTAGGTT TAGCTCTTTC AGTTTGTAGC TTCAGGAGAC AATTACCGAT ACTTAAATCA
GCATTAAACT GGATAGATTA CAAATCACCT AGTCAAATAG CAAAGCTTTC TGTTGCTCAA
ACAATAGTGA CTAATAATTG CGCAAAGAGC TTAGAGAAAA TTAAACTTAA TTTAAAAAAA
CAAGGTTGGA ATGTAAAAGA AACAGATGGA AGAATAGCTG CTCGCCAAGG AGTAATAGGT
AGATTAGGAC CTATATTAAT TCATCTAGGC ATGATCCTAT TAATGATAGG GGCAACATAC
GGATCATTAA ATGGAAAAAC CATAGAAAAA TTTTTAGCTC CTGGTAGATC AATAGATTTA
TTGAACAATA ATGAAGAGAA AGGGTTAACC ATTGAATTGC AAAAGTTTCA AATCGAAAGA
GACCCTCAAG GAAGAGCTGA GCAATATAAA TCTATAGTCA ATGTTATTGA GCCAAATGGT
AATAATCAAT CAAAAGAAAT TAGTGTTAAT TATCCACTAA GGTACAAAGG TCTAACATTA
TATCAAGCTG ACTGGTCTTT AGCAGCAATA ACTATTAAAA TTGATAATAG TCCGAAATTA
CAAATTCCAA TAAAACCCAT TTCTGAGCTG GGTGAACAAG TTTGGGGGAC AATTATACCG
ACTAATAAAG ATGGTAAAAA CCAGATTTTA TTAACCGTAG ATAGTGAATT AGGACCAGTA
AATATTTATG ATAATGATGG AACACTACTG ACAAAGTTAA TTATAAATAA GGAAGAAAAA
GTCAAAGGAG CTTTAATAAA GATAATAAAT ATAATCCCAA GTAGTGGATT ACTTTTAAAG
CACGACCCTG GAGTACCTTT TGTATATTTA AGTTTTGCGA TAATACTTAT TGGTGGTTCA
CTTAGTATTA TTTCAACTAA AAAAATCTGG GTCTTACATG AAAATGAAAA ATCTATGATT
TATATAGGTG GATTAAGTAA TAGAAATCTC TCTGGTCTTT CAAAAGAATT GCCGAATCTT
ATTAGTTTTT TAGAGACTTA G
 
Protein sequence
MKKISQVLNW LSSLKIAILL LLVIAVSCAA GTLIPQQESN QFYYDNFNKN PFLGIINAKI 
LLLFEFDHVY TSFWFLFLLI WLGLALSVCS FRRQLPILKS ALNWIDYKSP SQIAKLSVAQ
TIVTNNCAKS LEKIKLNLKK QGWNVKETDG RIAARQGVIG RLGPILIHLG MILLMIGATY
GSLNGKTIEK FLAPGRSIDL LNNNEEKGLT IELQKFQIER DPQGRAEQYK SIVNVIEPNG
NNQSKEISVN YPLRYKGLTL YQADWSLAAI TIKIDNSPKL QIPIKPISEL GEQVWGTIIP
TNKDGKNQIL LTVDSELGPV NIYDNDGTLL TKLIINKEEK VKGALIKIIN IIPSSGLLLK
HDPGVPFVYL SFAIILIGGS LSIISTKKIW VLHENEKSMI YIGGLSNRNL SGLSKELPNL
ISFLET