Gene PMN2A_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0974 
Symbol 
ID3606360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1467585 
End bp1468577 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content38% 
IMG OID637687843 
ProductSBC domain-containing protein 
Protein accessionYP_292167 
Protein GI72382812 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG ACATTCTGCT TTTAACTGCT CTTGTTGCAG TTATTTTAAT GGGTTCTGCA 
ATGTGCTCAG GGATTGAAGC AGCATTATTA GCAGTTAACC CATTACGCGT ACATGAGCTC
GCAAGGAGAA AGCCCAAAGT ACTTGGAGCT AGAAGATTAG AAAAATTACG CCACAGAATT
GGAAGGACTT TAACTGTAGT AACAATTGCA AATAACAGTT TCAATATTTT TGGAAGTTTG
ATGGTTGGAA GCTACGCAAC TTACATATTT CAAGATCGAA TAGGAAATGT AAAACCAATA
TTTTTTGTTG GCCTAACTAT TCTTGTTTTA CTTCTTGGAG AAATTGTTCC CAAAGCTCTC
GGCACAAGAC TTGCATTGCA AATCAGTTTA ACAAGCGCTC CTGTCCTTGA TTTCTTAAGC
ATAGTTATGC GTCCACTGCT AATAGTTCTT GAACGTCTAC TACCAATTAT CACTGCCAAG
AGCGAGCTAA CAACAGACGA AGAAGAAATA AGACAGATGG CCAGACTTGG ATCTCAAATA
GGTCAAATAG AAGCTGATGA GGCTGCAATG ATATCCAAAG TTTTCCAGCT AAATGATCTT
ACTGCTAAAG ATTTGATGAC TCCACGAGTT GCCGCTCCAA CACTTCCAGG AAGAGTTTCT
TTGCAATCTG TCAAATCAAA CTTATTAGAA AATAATGCAA CATGGTGGGT AGTATTAGGT
GAAGAAGTAG ACAAGGTTGT TGGAGTTGCT AACCGTGAAA AGTTATTAGC CTCTTTACTT
CAAGGAGACT CTCATTTAAC TCCTTATGAT CTAAGCGAGA ATGTAGAGTT TGTACCCGAA
ATGATTCGAG TAGATAGACT ACTTCTTGGT TTTAATGAAG ACAAAAATGG AGTTAGAGTT
GTGGTAGATG AGTTTGGTGG ATTTGTTGGT TTAATAGGAG CAGAAGCTGT ATTGGCAGTT
TTAGCTGGTT GGTGGAGGAA GTCAAATAAA TGA
 
Protein sequence
MSQDILLLTA LVAVILMGSA MCSGIEAALL AVNPLRVHEL ARRKPKVLGA RRLEKLRHRI 
GRTLTVVTIA NNSFNIFGSL MVGSYATYIF QDRIGNVKPI FFVGLTILVL LLGEIVPKAL
GTRLALQISL TSAPVLDFLS IVMRPLLIVL ERLLPIITAK SELTTDEEEI RQMARLGSQI
GQIEADEAAM ISKVFQLNDL TAKDLMTPRV AAPTLPGRVS LQSVKSNLLE NNATWWVVLG
EEVDKVVGVA NREKLLASLL QGDSHLTPYD LSENVEFVPE MIRVDRLLLG FNEDKNGVRV
VVDEFGGFVG LIGAEAVLAV LAGWWRKSNK