Gene PMN2A_0971 details

Gene Information

• Locus tag: PMN2A_0971
• Symbol: atpC
• ID: 3606357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1465040
• End bp: 1465447
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637687840
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_292164
• Protein GI: 72382809
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTTA CTCTACGAGT TCTTGCTCCT GATCAGAGCG TATTTGACGA TACTGCTGAT 
GAAATAATAC TTCCGAGCAC TACAGGGCTT TTGGGGGTAT TACCTGGTCA CATTTCAATG 
GTTACTGCTA TTGATTTTGG TGTATTGAGG GTTTTAAAAA ATGGGAATTG GGACTCAATA 
GCCTTAACTG GAGGTTTTGC AGAAGTTGAA TCTAACGAAG TTACCGTTTT AGTAAATAAA 
GCTGAAATGG GGAAAAATAT TGACTCTGGC AAAGCTGAAG CTGAATTAGA AAAAGCTAAA 
AATCAACTAA GCCAAAACAA GGATCAGGGT AATTCTCCTG AAAAAATCAA AGCACAAGAA 
ACATTGAACA AAGCAAAAGC TTGGTTTCAA GCATCAAAAT CAGACTAA 

 

Protein sequence

MTLTLRVLAP DQSVFDDTAD EIILPSTTGL LGVLPGHISM VTAIDFGVLR VLKNGNWDSI 
ALTGGFAEVE SNEVTVLVNK AEMGKNIDSG KAEAELEKAK NQLSQNKDQG NSPEKIKAQE 
TLNKAKAWFQ ASKSD