Gene PMN2A_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0970 
Symbol 
ID3606356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1463515 
End bp1464981 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content42% 
IMG OID637687839 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_292163 
Protein GI72382808 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTT CTGCTACCGC TACTGTTGGA ACTAAGGGTG TTGTTCGCCA AGTAATTGGT 
CCTGTTTTAG ATGTTGAATT CCCAGCTGGC AAGCTGCCTT CAATTCTTAA TGCATTAAGG
ATTGAAGGCA AAAATCCTGC TGGTCAAGAT GTTGCACTGA CTGCTGAAGT TCAACAATTA
TTAGGTGATC ATCGGGTTAG AGCCGTTGCT ATGAGCGGAA CTGATGGATT AGTTAGAGGT
ATGGAAGCTT TAGACACAGG AGCTCCAATT TCTGTACCTG TTGGTGAAGC CACCCTTGGA
AGAATTTTCA ACGTCCTTGG AGAACCTGTA GATGAGCAAG GCGACCTTAA GAACGTAACT
ACCTCTCCAA TACATCGATC AGCCCCAAGC CTTACAGATT TAGAAACAAA ACCAAAAGTA
TTTGAGACTG GTATCAAAGT TATCGATTTG CTGGCTCCAT ACCGTCAGGG TGGAAAAGTT
GGATTATTTG GTGGGGCTGG AGTAGGTAAA ACAGTTCTAA TTCAAGAGCT CATAAACAAT
ATTGCCAAAG AGCATGGTGG CGTATCAGTT TTTGGTGGAG TGGGAGAAAG AACTAGAGAA
GGTAACGATT TATATGAAGA ATTTAAAGAG TCTGGTGTGA TTAATTCTGA AGATCTAACC
AAGTCAAAAT TAGCTTTGTG CTTTGGTCAA ATGAATGAGC CCCCAGGCGC AAGAATGAGG
GTGGGCCTAT CTGCCTTGAC TATGGCTGAG CATTTCCGTG ACGTAAATAA GCAAGATGTT
CTTCTGTTCA TCGATAATAT CTTCAGATTT GTTCAGGCTG GATCAGAAGT ATCTGCTTTG
CTAGGGCGTA TGCCATCTGC TGTTGGATAT CAGCCAACCT TAGGAACTGA CGTGGGAGAG
CTTCAAGAAA GGATTACCTC TACCCTTGAA GGATCTATCA CCTCAATTCA GGCTGTTTAT
GTACCTGCTG ACGACTTAAC GGACCCTGCA CCTGCTACTA CTTTTGCTCA CTTAGACGCA
ACTACAGTTT TAGCAAGAGC TCTTGCAGCC AAGGGAATTT ATCCTGCTGT TGATCCACTT
GACTCAACCA GCACAATGTT ACAGCCGTCT GTTGTAGGAG ATGAGCATTA CCGCACGGCC
AGAGCTGTTC AATCAACACT TCAGAGATAT AAGGAATTGC AAGATATTAT TGCGATTTTG
GGATTGGACG AACTATCAGA AGAGGATAGG AAGACAGTTG ATCGTGCCCG CAAAATTGAG
AAATTCTTAT CTCAACCATT CTTTGTTGCT GAAATATTTA CAGGTATGTC AGGTAAATAC
GTCAAATTAG AAGATACGAT TAAAGGTTTC AATATGATTC TTTCAGGTGA ACTTGACCAA
CTCCCTGAGC AAGCTTTCTA TCTTGTTGGA AGCATTGATG AAGTGAAAGC TAAAGCAGAA
AAAATAGCAT CTGAAGCAAA AGCTTAA
 
Protein sequence
MAASATATVG TKGVVRQVIG PVLDVEFPAG KLPSILNALR IEGKNPAGQD VALTAEVQQL 
LGDHRVRAVA MSGTDGLVRG MEALDTGAPI SVPVGEATLG RIFNVLGEPV DEQGDLKNVT
TSPIHRSAPS LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINSEDLT KSKLALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFIDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGE
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARALAA KGIYPAVDPL
DSTSTMLQPS VVGDEHYRTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR KTVDRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEDTIKGF NMILSGELDQ LPEQAFYLVG SIDEVKAKAE
KIASEAKA