| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0955 |
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| Symbol | |
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| ID | 3606341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 1450020 |
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| End bp | 1451933 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637687825 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_292149 |
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| Protein GI | 72382794 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAT CAGATAAACA AGAACAAAGA AAGAATCAAT TCACTGATAT AAAAACATTC
CCCGTTTCAT TTGCTTTAGA AGAAATAAAA GAGAATATTT CTATTTTCAC TAACACTCCT
TCTAAACCTT CTAAAGAAGA AATCATTAAT CAAGCATTTA AGTTTCATTC ACAAGGAAAC
ATTTCAGAAG CAGCAAAATA TTATCAATAT TTAATCAATC AAGGTTTTAA TGATCACAGA
ATTTTTTCTA ATTATGGAAT AATTTTAAAA AGTCTTGGGA AATTAAAAGA AGCAGAATTA
TCTACTCAAA AAGCAATTGA AATCAAACCT GATTTCGCAG AGATGCATTC CAATCTAGGA
AATATATTAA GAGATCTTGA CAAGTTAAAA GAAGCAGAAA TCTCATTACG TAAAGCAATT
GAAATCAAAC CTAATTACGC AGAAGCATAT TATAATTTGG GAAATATATT AAAAGATCTT
GGCAAGTTAA AAGAAGCAGA AATCTCATAC CGCAAAGCAA TTGAAATCAA ACCTGATTAC
GCAAAGGCTC ATTACAATCT GGGAAACTTG TTGAAAGATA ATGGCAAGTT AAAAGAAGCA
GAATTGTCAT ACCTCAAAGC AATTGGAATC AAACCTGATT ACGCAAAGGC TCATTCCAAT
CTGGGAAACT TATTGAGAGA ACTTGGAAAC TTACAAGAAG CAGAAATGTC ATATCGCAAA
GCGATTGAAC TCAATCCTAC TTTCGCAGAG GCTCATTACA ATCTGGGAAA CTTATTGAAA
GAACTTGGAA ATTTACAAGA AGCAGAAATG TCATATCGCA AAGCGATTGA AATTAAACCT
GATTACGCAG AGGCTCATTC CAATCTGGGA AACTTATTGA GAGAACTTGG AAACTTACAA
GAAGCAGAAA TGTCATATCG CAAAGCGATT GAAATTAAAC CTGATTACGC AGAAGCATTT
TGGAATCTTT CATTAGTTGA ACTACTTCAA GGTGACTATA TAAATGGTTT AGAAAACTAT
GAATTTAGAT TCAAAAAAAA GAAGCCTACT ATTACTCAAT GTATTACAAA ACTCAAACGA
ATCGAGCACA AAAAATTACA AAAAGGAGAA AAGCTATTAG TCGTCACTGA GCAAGGTTTA
GGAGATACCC TTCAATATAT GAGATATATT CCTTACCTTA GAAATCAAGG ACTCAATATT
TCTTTTTGTG CTCAAACAAA ACTACATTCA TTGATCCAAG CCTCAGGGAT TGATCAAAAT
CCATTAACTC CAGAACAAGC TGAGACAATT TCAGACGGTA AATGGATACC ACTATTATCT
TTACCTAGAT ATCTACAAGT ACGTCAAAAA AATCCAATCA TTTCCAAACC ATATATCTTT
TCAACAGATG AACTAACGAA GAAGTGGAGG GATATACTCT CTGAAGAAAA AAGACCAATC
ATTGGTATTA ACTGGCAAGG GAATCCAAAT GTCGAAAAGG AAGAACTAAA AGGTCGCTCA
CTAGCTTTAG AAACCTTTGC CACTCTTGCT AGGAACAATA ACTTTAAATT TCTTTCACTA
CAAAAAGGTT TTGGTTCAGA GCAACTTGAA AAATGCTCTT TCAGAAATAA GTTTGTTAAC
GGCCAAGCTC AAATTGATGA GACTTGGGAT TTTCTTGAAA ATGCTGCCAT AATTGAAAAC
TGTGATTTAA TTATTACTTC TGACACTTCA ATTGCTCACC TAGCTGGAGG ATTAGGCAAA
TCAACCTGGT TACTCCTTCA ACATATTCCT GAATGGAGGT GGGGACTTGA AAGGGAGAAT
ACATTTTGGT ACCCATCGAT GAGATTATTT CGTCAAAAAG AGCGACATAA TTGGCAAGAG
GTTATGGAAA GAGTATCAAG TAAACTAAAA AAGAAATTAG AAGAACAAAT ATAA
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| Protein sequence | MEKSDKQEQR KNQFTDIKTF PVSFALEEIK ENISIFTNTP SKPSKEEIIN QAFKFHSQGN
ISEAAKYYQY LINQGFNDHR IFSNYGIILK SLGKLKEAEL STQKAIEIKP DFAEMHSNLG
NILRDLDKLK EAEISLRKAI EIKPNYAEAY YNLGNILKDL GKLKEAEISY RKAIEIKPDY
AKAHYNLGNL LKDNGKLKEA ELSYLKAIGI KPDYAKAHSN LGNLLRELGN LQEAEMSYRK
AIELNPTFAE AHYNLGNLLK ELGNLQEAEM SYRKAIEIKP DYAEAHSNLG NLLRELGNLQ
EAEMSYRKAI EIKPDYAEAF WNLSLVELLQ GDYINGLENY EFRFKKKKPT ITQCITKLKR
IEHKKLQKGE KLLVVTEQGL GDTLQYMRYI PYLRNQGLNI SFCAQTKLHS LIQASGIDQN
PLTPEQAETI SDGKWIPLLS LPRYLQVRQK NPIISKPYIF STDELTKKWR DILSEEKRPI
IGINWQGNPN VEKEELKGRS LALETFATLA RNNNFKFLSL QKGFGSEQLE KCSFRNKFVN
GQAQIDETWD FLENAAIIEN CDLIITSDTS IAHLAGGLGK STWLLLQHIP EWRWGLEREN
TFWYPSMRLF RQKERHNWQE VMERVSSKLK KKLEEQI
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