Gene PMN2A_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0920 
Symbol 
ID3606305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1423271 
End bp1424215 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content39% 
IMG OID637687789 
ProductRNAse Z 
Protein accessionYP_292114 
Protein GI72382759 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGTCA CTTTTCTAGG AACAAGTTCA GGAGTCCCAA CTCTTAATAG GAACGTATCA 
GCGATGGTAC TAAAGCCTCC ACAAAGGTCA GAATTGTGGT TGTTCGATTG TGGTGAAGGT
ACACAGCATC AGTTCATTAG AAGTAATCTT AAGTTATCTC AAATCAAAAA AATATTTATT
ACCCATATGC ATGGGGATCA TATTTATGGT CTACCAGGAC TTCTAGCAAG TATTGGATTA
GCAGGCAGCA GCTCTGGAAT TGAGTTGTAC GGGCCAGCTC CGCTTAAGAA CTTTATTGAT
TCTTGTCTAT ACAACAGTTC AAGCCGATTG GCTTATTCAC TCAAATTCCA TAGGGTCGAA
AATGCTGCTA ATAATAAAGA AATTTTGTTT GAAGATTCAG AGTTAGAAGT CAAAACTGCT
CCACTCAAGC ATCGAATCCC ATCTTTTGCT TACAGAGTGA ATCAAAAAAC TAGGCCAGGC
AGATTCGATA TAGAGAAAGC AAAATCAAAA GGAATACCTC CTGGTCCCGT TTATGCAGAC
CTTCAGAGAG GGGAGGAAGT GAGATTAGAA GATGGTCGCA TTTTTTCTGG GAAAGAATTC
TGCGGTCCAC CTAGGCCTGG GGTAAGCATG GTTTATTGCA CAGATACTGT TTATACAGAA
TCAGCAATTG AGATTTCTAG AAAAGCCGAT CTACTAATCC ATGAATCAAC TTATTCTTAT
AAAGAAACTG AAATGGCATA TGAACGCGGA CATTCAACTG CAACAATGGC CGCTCAGATT
GCTGCAAAAG CGAATGTTGA TCAACTAATT CTTACTCATT TGAGTCCGAG ATATACCCCT
GGCAATCAAA CATGTCCTAA TGATTTGCTT AATGAAGCAA AAGCAATTTT TCCAAATACC
CAGTTAGCAA AAGACTTTCT GCAAATTGAC ATAAATAAAA GCTGA
 
Protein sequence
MQVTFLGTSS GVPTLNRNVS AMVLKPPQRS ELWLFDCGEG TQHQFIRSNL KLSQIKKIFI 
THMHGDHIYG LPGLLASIGL AGSSSGIELY GPAPLKNFID SCLYNSSSRL AYSLKFHRVE
NAANNKEILF EDSELEVKTA PLKHRIPSFA YRVNQKTRPG RFDIEKAKSK GIPPGPVYAD
LQRGEEVRLE DGRIFSGKEF CGPPRPGVSM VYCTDTVYTE SAIEISRKAD LLIHESTYSY
KETEMAYERG HSTATMAAQI AAKANVDQLI LTHLSPRYTP GNQTCPNDLL NEAKAIFPNT
QLAKDFLQID INKS