Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0920 |
Symbol | |
ID | 3606305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1423271 |
End bp | 1424215 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687789 |
Product | RNAse Z |
Protein accession | YP_292114 |
Protein GI | 72382759 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAAGTCA CTTTTCTAGG AACAAGTTCA GGAGTCCCAA CTCTTAATAG GAACGTATCA GCGATGGTAC TAAAGCCTCC ACAAAGGTCA GAATTGTGGT TGTTCGATTG TGGTGAAGGT ACACAGCATC AGTTCATTAG AAGTAATCTT AAGTTATCTC AAATCAAAAA AATATTTATT ACCCATATGC ATGGGGATCA TATTTATGGT CTACCAGGAC TTCTAGCAAG TATTGGATTA GCAGGCAGCA GCTCTGGAAT TGAGTTGTAC GGGCCAGCTC CGCTTAAGAA CTTTATTGAT TCTTGTCTAT ACAACAGTTC AAGCCGATTG GCTTATTCAC TCAAATTCCA TAGGGTCGAA AATGCTGCTA ATAATAAAGA AATTTTGTTT GAAGATTCAG AGTTAGAAGT CAAAACTGCT CCACTCAAGC ATCGAATCCC ATCTTTTGCT TACAGAGTGA ATCAAAAAAC TAGGCCAGGC AGATTCGATA TAGAGAAAGC AAAATCAAAA GGAATACCTC CTGGTCCCGT TTATGCAGAC CTTCAGAGAG GGGAGGAAGT GAGATTAGAA GATGGTCGCA TTTTTTCTGG GAAAGAATTC TGCGGTCCAC CTAGGCCTGG GGTAAGCATG GTTTATTGCA CAGATACTGT TTATACAGAA TCAGCAATTG AGATTTCTAG AAAAGCCGAT CTACTAATCC ATGAATCAAC TTATTCTTAT AAAGAAACTG AAATGGCATA TGAACGCGGA CATTCAACTG CAACAATGGC CGCTCAGATT GCTGCAAAAG CGAATGTTGA TCAACTAATT CTTACTCATT TGAGTCCGAG ATATACCCCT GGCAATCAAA CATGTCCTAA TGATTTGCTT AATGAAGCAA AAGCAATTTT TCCAAATACC CAGTTAGCAA AAGACTTTCT GCAAATTGAC ATAAATAAAA GCTGA
|
Protein sequence | MQVTFLGTSS GVPTLNRNVS AMVLKPPQRS ELWLFDCGEG TQHQFIRSNL KLSQIKKIFI THMHGDHIYG LPGLLASIGL AGSSSGIELY GPAPLKNFID SCLYNSSSRL AYSLKFHRVE NAANNKEILF EDSELEVKTA PLKHRIPSFA YRVNQKTRPG RFDIEKAKSK GIPPGPVYAD LQRGEEVRLE DGRIFSGKEF CGPPRPGVSM VYCTDTVYTE SAIEISRKAD LLIHESTYSY KETEMAYERG HSTATMAAQI AAKANVDQLI LTHLSPRYTP GNQTCPNDLL NEAKAIFPNT QLAKDFLQID INKS
|
| |