| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0894 |
|---|
| Symbol | |
|---|
| ID | 3606279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1397587 |
|---|
| End bp | 1398942 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637687763 |
|---|
| Product | putative GPH family sugar transporter |
|---|
| Protein accession | YP_292088 |
|---|
| Protein GI | 72382733 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.351001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTT ATGCAATGGG AGATGCTGGA ACGGGATTAG CCGCAATACA GCTAGGTACT
TATCTATTTC TTTTTTTTAC TTGTGCTGCA GGAATTCCTG CATTTATTGC AGGCTCGCTT
CTGATGGTTT CAAAACTTTG GGATGCGATA AATGATCCTC TAATTGGATG GATGAGTGAT
CGCACCAGAT CAAGATGGGG GCCAAGGCTT CCATGGATGA TTGGAGGTGC TGTTCCACTT
GGTTTATTCC TTGCCGCAAT GTGGTGGGTC CCTCCTGGAG ATATAGATGC GAAAACAATT
TATTACGTAT TTGCAGCAAT TTTTTTGATG ACAGCTTATA CAGCAGTAAA TCTACCTTTT
GCAGCATTAT CTACTGAGCT AACTGAAAAT ATAGCTATTA GAACAAGACT TAATGCTGCA
AGATTTACTG GATCTATTAT AGCTGGAACC ACTGGATTAA TAGTGGCTGC AGGCTTCTTA
TCTCAAGGAG TAGAAGGTTA TACTTCGATG GGGAGAGTAA CAGGAGTTAT TGCTACTTTT
ACCACGTTAA TTGCTTGCTG GGGACTAGCC CCATTTGCAA AAAAAGCCAG AAAGCCCACT
TCTCAATCTG AACCTTTTAA TCAGCAGCTA AAAAGAGTTT TAAATAATAA ACTTTTCACA
CGAATTATTG CTCTTTACTT GCTGCTTTGG TGCGGACTCC AATTAATGCA AACCGTTTCA
TTAATCTATC TTGAGCAAGT AATGCTTGTT CCAATAGAAA TTTCAAAATG GATCCCTATA
CCATTTCAAA TTAGTACTCT ATTAGGTCTA CAGTTTTGGA GCTTTTACTC CAATAAATAT
GGAAGAATAT CAGCACTATT CAAAGGTGGG AAAATATGGG TATTAGCCTG TTTTTTAGTT
ATATTTATGC CACCAATAAC TAAAGGAGTC AGTATCAATT CTTTATTAGC CTTTGGTAAT
ATTGATGGTA TAAAGATGCT AATTCTTTTA TTTATAATTA TTTTAGTAGG GTTTGGAGCT
TCTACAGCAT ATCTTATTCC TTGGTCTTTA CTTCCTGATG CTATTGATCA AGATCCCGAA
AAGCCTTCAG GAATATATAC AGCATGGATG GTTTTTATTC AGAAAATAGG TATTGGTTTA
AGCGTTCAAT TTCTAGGAGT TCTTTTATCT TTATCAGGAT ATAAATCATC CACTAATTGC
TTATCAAGTC TTGAAGACTT AGATCAACCT CTAACAGCAA TTATTACTAT TAGATTATGC
ATGGGATTAA TACCTTCTTT ACTAGTAATT GCTGGATTAA TAACTATGAA ACCGTGGCGA
AGTTTAGATT TCAAATCTAG GAGATTAAGT AAATGA
|
|---|
| Protein sequence | MISYAMGDAG TGLAAIQLGT YLFLFFTCAA GIPAFIAGSL LMVSKLWDAI NDPLIGWMSD
RTRSRWGPRL PWMIGGAVPL GLFLAAMWWV PPGDIDAKTI YYVFAAIFLM TAYTAVNLPF
AALSTELTEN IAIRTRLNAA RFTGSIIAGT TGLIVAAGFL SQGVEGYTSM GRVTGVIATF
TTLIACWGLA PFAKKARKPT SQSEPFNQQL KRVLNNKLFT RIIALYLLLW CGLQLMQTVS
LIYLEQVMLV PIEISKWIPI PFQISTLLGL QFWSFYSNKY GRISALFKGG KIWVLACFLV
IFMPPITKGV SINSLLAFGN IDGIKMLILL FIIILVGFGA STAYLIPWSL LPDAIDQDPE
KPSGIYTAWM VFIQKIGIGL SVQFLGVLLS LSGYKSSTNC LSSLEDLDQP LTAIITIRLC
MGLIPSLLVI AGLITMKPWR SLDFKSRRLS K
|
|---|
| |