Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0879 |
Symbol | |
ID | 3606263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1385572 |
End bp | 1386246 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637687747 |
Product | ATP-dependent Clp protease-like protein |
Protein accession | YP_292073 |
Protein GI | 72382718 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.179255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGCAT CTTCCCCATA TTATGGCGAC TCTGCCGTAA TGAGAACTCC GCCCCCTGAT TTGCCATCAC TTCTTCTAAA AGAAAGGATC GTTTATTTAG GCTTGCCATT ATTTTCCGAT GATGATGCCA AAAGGCAACT TGGAATGGAT GTAACTGAAC TAATTATTGC CCAACTTCTT TTTCTGGAAT TTGATAATTC TGAGAAACCT ATTTATTTTT ATATAAACTC AACTGGAACA AGCTGGTACA CAGGAGATGC AATTGGATTT GAAACTGAAG CCTTTGCAAT CTGCGACACC CTCAGATACG TCAAGCCTCC CGTGCATACT ATTTGCATAG GCCAAGCGAT GGGGACCGCA GCAGTAATAC TTTCAGCAGG AACAAAAGGT CAACGTGCAG CATTACCTCA TGCATCTATA GTCCTTCATC AGCCTAGAAG TGGGGCTCAA GGCCAAGCAA CTGATATTCA AATCAGGGCG AATGAGGTTA TTCACAATAA GAAAGCCATG CTAGAAATAC TTAGTCATAA CACTGGAAGA TCAGTAGATC AATTATCCAA AGACTCTGAT CGAATGAGTT ATTTGAACCC TCATGAAGCA GTTGATTATG GGATTATAGA TCGCGTTCTT ACTAGTAGAA AAGACTTGCC AAGCGAGAAA GTTTTGTCCA CATAA
|
Protein sequence | MTASSPYYGD SAVMRTPPPD LPSLLLKERI VYLGLPLFSD DDAKRQLGMD VTELIIAQLL FLEFDNSEKP IYFYINSTGT SWYTGDAIGF ETEAFAICDT LRYVKPPVHT ICIGQAMGTA AVILSAGTKG QRAALPHASI VLHQPRSGAQ GQATDIQIRA NEVIHNKKAM LEILSHNTGR SVDQLSKDSD RMSYLNPHEA VDYGIIDRVL TSRKDLPSEK VLST
|
| |