Gene PMN2A_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0865 
Symbol 
ID3606246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1369106 
End bp1369942 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content38% 
IMG OID637687731 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_292059 
Protein GI72382704 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.778687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTACAA GTAAAAGAAA CCCTTTGGTT CGAAAATTAA GGGGTCTTTT GAAAAAAACT 
GGACGTGAAG AGCATTCTTC TCTTTTGCTT GAGGGGTCTC ATTTGTTAGA AGAGGCTTTG
AAAACAAATT TTTTGCCAAC AGAAGTTATT GCAACTCCTG AATGGTGTGA TCAGCATGAG
GAGATTTTAA AAAAAATAGC TTCAAGAACT TTGTTAACCC TAGTAACCAA AAACGTTTTA
GAAACATCTT TGTCAACAGT CACACCTGAT GGTGTCGCAG CGATATTCCC AATGCAAGGG
TTACCAAAAT CGGGAAAAGC CCCTAAACAT ATTTTGGCTT TGGATAGGAT TCAAGATCCA
GGTAATTTGG GAAATTTATT TCGATCAGCT CTTGCTGGTG AATATGAGGC TATGTGGTTA
GCTTCTGGAG CCGATCCACT TAATCAAAAG GTTTTAAGAT CCTCCGCTGG CTCAGTTCTC
CATATGCCTT TTGAACGGAT TGGACATTCA TCTTCTTCAA GTATTGAAAT GCTTGTTTCA
AAACTCAATA TTGCAATTGA TGATAATTAC CAAGTAGTAG GGACAATTTC ACCAAATAAA
ATTACTGATA AGAAAGTGAA ACCTTATTGG GAATTAGACT GGGATCTCCC TACAGTATTG
GTTCTTGGTA ATGAGGGTTC AGGTGTTCAT GCTTCAATTG AAGCCTGTTG TACAGACTTT
GTTACGTTGC CTCATAGCTC ATTAGTTGAT TCACTTAATG TGGCATCTGC TGCAGTTCCT
CTCTTGTTGG AGCGACAAAG AGTAAAAATG GTTAAGGGTA TGCAAAAAAA ATCGTGA
 
Protein sequence
MITSKRNPLV RKLRGLLKKT GREEHSSLLL EGSHLLEEAL KTNFLPTEVI ATPEWCDQHE 
EILKKIASRT LLTLVTKNVL ETSLSTVTPD GVAAIFPMQG LPKSGKAPKH ILALDRIQDP
GNLGNLFRSA LAGEYEAMWL ASGADPLNQK VLRSSAGSVL HMPFERIGHS SSSSIEMLVS
KLNIAIDDNY QVVGTISPNK ITDKKVKPYW ELDWDLPTVL VLGNEGSGVH ASIEACCTDF
VTLPHSSLVD SLNVASAAVP LLLERQRVKM VKGMQKKS