| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0834 |
|---|
| Symbol | |
|---|
| ID | 3606215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1340170 |
|---|
| End bp | 1341456 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637687700 |
|---|
| Product | SAM-binding motif-containing protein |
|---|
| Protein accession | YP_292028 |
|---|
| Protein GI | 72382673 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 |
|---|
| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATG AGTCAAAACA GATACACGTA ATCGGAATTG ATACTTCAAG TGTTGAAAGT
TTTTTTGAAG CTAAAAAAAA ACCAATTTTT AAAGCTGAAA GAATCACTGG TCCTCAAAGA
ATTTTAGATT CATTCAAAAC TTGGTTAAAG GATAAAAATA TAAAAAACAA TAAGTTCGAG
TTCTTTTCAA CTGACAAACT AAATGACTTT ATAGATCTAT TAAAAAAGGA CAAGAAAAAA
ACAATTGTGT TTTCTGGTGG TGATCCTCTT TGGTTTGGGA TTGGTAGATT ATTAATTCAA
AACTTTCCTT TATCAAATCT TTATTTTGAG CCAGCCGCGA CCTCTTTCCA ACTCGCTTTT
TCCAAACTTG GCAAACCTTG GCAAGATACA CAATGGATCA GTCTTCATGG AAGAGACCCG
CTTCAATTAG AAAAAGCAAT TAAAAAGCTT CCTTCTTCAC TTGTGGTTTT AACTGACTCA
AATAGAGGAG GAGCTAAGGA GGTTTATCAA TTAATGGATT CCTTGGAACT TCAGAAAAAA
TATGAATTTT GGACTTTCGA AAGGCTTGGA TATATCAATG AAAGAATTCT AAAAATATCT
TCTGTTGATG ATTTCCCAAT TGATCTTGAT CCATTGCATC TTGTGATTCT TTTAAAAAAA
GAAGAGCCTC TAATACAATC AATAGATTTA CCTTTATTTG GAATTGTTGA TTCAGTTTTT
CTTCAAAATG CAGACTGCCC TGGGTTAATG ACAAAAAAAG AAGTTAGGGT TCAAATTCTT
GCCGAACTTA ATCTCCCAAA GCAAGGAATA ATTTGGGACA TAGGAAGTGG AGTTGGGAGT
ATTGGTTTAG AAGCATTAAG GATATCTCCA AATCTAAAAT TAGTATCCAT TGATAAAAGA
GTTGGAAGTA CAAATATAAT CAAGGAAAAC GCCAGAAGGC TTGGTGTTAA GCCATCATTG
ATAATTGAGG ATGAAGCATT AAATATATTT AAACAAAATA AAATTACATC TAGTCTTTCA
AAACCAGAAA GAGTTATTAT CGGAGGCGGT GGCTCAAACT CACATTTAAT TCTTGAAGAA
GTTTTGAAGC TGATAAATAG TACTTGTATA ATAGTTATAC CACTAATATC ATTAAAATCT
ATATCAAAAT TAGAGTCGAT TTTAAAGCCT AAAGCCCACA AGTTATCTAT TAGTCAACAT
CAATCGTATA GAGGTGTAAG TATTGGAGAA GATATAAGAT TATCTCCTTT AAATCCTGTT
TTTATTTTGA AGGGTGAAAT TAAATAA
|
|---|
| Protein sequence | MPDESKQIHV IGIDTSSVES FFEAKKKPIF KAERITGPQR ILDSFKTWLK DKNIKNNKFE
FFSTDKLNDF IDLLKKDKKK TIVFSGGDPL WFGIGRLLIQ NFPLSNLYFE PAATSFQLAF
SKLGKPWQDT QWISLHGRDP LQLEKAIKKL PSSLVVLTDS NRGGAKEVYQ LMDSLELQKK
YEFWTFERLG YINERILKIS SVDDFPIDLD PLHLVILLKK EEPLIQSIDL PLFGIVDSVF
LQNADCPGLM TKKEVRVQIL AELNLPKQGI IWDIGSGVGS IGLEALRISP NLKLVSIDKR
VGSTNIIKEN ARRLGVKPSL IIEDEALNIF KQNKITSSLS KPERVIIGGG GSNSHLILEE
VLKLINSTCI IVIPLISLKS ISKLESILKP KAHKLSISQH QSYRGVSIGE DIRLSPLNPV
FILKGEIK
|
|---|
| |