Gene PMN2A_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0831 
Symbol 
ID3606212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1338209 
End bp1339303 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content40% 
IMG OID637687697 
Productdiaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 
Protein accessionYP_292025 
Protein GI72382670 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATT TGGCTGAGGA TCAAAAAATA TGGGTGCCAT GGATGAGACG CTCAATCCAA 
CTGGCTTTAT TAGCAGAAGG CAGGACAAGC CCAAACCCCC TAGTTGGATC TATTGTGTTG
GATTCGAATG GAAGACTTGT TGGAGAGGGA TTTCATTCAG GCGCAGGGAA TCCTCATGCT
GAAATAGAAG CACTTGCTCA GGCGGGAAAG AAGGCGCTTG ATGGAACAAT CGTTGTAACT
TTAGAACCCT GTTGCCATCA AGGCTTAACA CCTCCCTGTA CAGAAGCAAT AATAAGAGCA
GGTCTAAAAA AAGTTGTTGT TGGGATGGTC GATCCTGATC CAAGAGTCTC AGGTAATGGA
ATCTCAAGAT TGAAAGACTC TGGACTTGAA GTAATCGAGG GGGTTTTGAG TCAAGAATGT
GAATCAATTA ATCGCGAATT TAGTTTTCGA GTTCGTCATG GACGTCCTTG GGGAATTCTA
AAATGGGCAA TGAGCTTAGA TGGAAAAATT GGCTTGCCAA ATGGTTGTAG TAAGTGGATT
ACAGATATTC CTGCAAGGCA TTCGGTTCAT AGAATTAGAT CTAAGTGCGA TGCAGTAATA
GTTGGAGGAG GAACAGTTCG GGCCGATAAT CCACTTTTAA CTTCAAGGGA AAAGTTAGAT
TTTGAGCCAT TAAGGGTTGT TTTTTCAAAA ACTTTGAACT TGCCTCAATC TGCAAAACTT
TGGGATACAA AAATCGCTAG AACAATTATT GCTTATGGGC CAGAGGGTGA TGAATCTTTC
TTTTCTGATT TGCCAAATGG TCCAGAGAAA TTGAGATTGA ATTCGAATAA TCCATCCGAA
TTACTCTCCT CACTTGCGAA AAAAGGCTGC AATAAAATTC TTTGGGAATG CGGTCCTCAA
CTTGCTACAA GTGCAATCGA AGCAAATTGT GTTCAGGAAT TAGTAGTTTT TGTAGCACCA
AAACTCTTAG GAGGGATGTC TTCGATGAGT CCTTTGAACA ATTTTGGGTT TGAATCAATA
AGTTCTTCCT ATAAATTGCA ACATTCTTTT TTAGATCGAA AAGGAGAAGA TATCTGTTGG
AGACTGATTT TTTAG
 
Protein sequence
MINLAEDQKI WVPWMRRSIQ LALLAEGRTS PNPLVGSIVL DSNGRLVGEG FHSGAGNPHA 
EIEALAQAGK KALDGTIVVT LEPCCHQGLT PPCTEAIIRA GLKKVVVGMV DPDPRVSGNG
ISRLKDSGLE VIEGVLSQEC ESINREFSFR VRHGRPWGIL KWAMSLDGKI GLPNGCSKWI
TDIPARHSVH RIRSKCDAVI VGGGTVRADN PLLTSREKLD FEPLRVVFSK TLNLPQSAKL
WDTKIARTII AYGPEGDESF FSDLPNGPEK LRLNSNNPSE LLSSLAKKGC NKILWECGPQ
LATSAIEANC VQELVVFVAP KLLGGMSSMS PLNNFGFESI SSSYKLQHSF LDRKGEDICW
RLIF