Gene PMN2A_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0828 
Symbol 
ID3606209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1334545 
End bp1335153 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content40% 
IMG OID637687694 
ProductSOS function regulatory protein, LexA repressor 
Protein accessionYP_292022 
Protein GI72382667 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAG AAACTCTAAC TACTGCACAG CAAGAACTCT ATGACTGGCT TGTAGATTTT 
ATTGGAGATC ATCATCATAG CCCTTCGATC AGGCAAATGA TGCAAGCTAT GGGTCTAAGA
TCTCCAGCAC CAATCCAAAG TCGTCTAAGA CATTTACAAC AAAAAGGGTG GATAAAATGG
CAAGAAGGTC AGGCAAGAAC GCTGCAATTA ATAGAAGAGA GTATTTCGGG GGTTCCTGTT
TTGGGAGCAA TAGCTGCAGG TGGGTTGGTT GAAACTTTTG ATGATGTACA GGAAACTCTA
GACTTAAATT CAGTTCTTCA ATTAAAGGGA CTTTTTGCTT TGACGGTAAA TGGAGATTCA
ATGATTGATT CTTTTATTGC AGACGGAGAT ATGGTTCTAA TGGAACCTGT TAATGAGCCC
GCTCGACTGA GAAACGGCAC GATTGTTAGC GCAATGGTTC CAGGATTAGG AACTACTTTG
AAACATTTTT TTCGTGATGG AAGTTTAGTT CGTTTAGAAG CCGCCAATAC ATCTTATGAC
CCTATAGAAA TTGATGCTGA ACAAGTTCAT ATTCAGGGAA AGTTAGCAGC TGTATGGAGG
AAAACTTAA
 
Protein sequence
MPEETLTTAQ QELYDWLVDF IGDHHHSPSI RQMMQAMGLR SPAPIQSRLR HLQQKGWIKW 
QEGQARTLQL IEESISGVPV LGAIAAGGLV ETFDDVQETL DLNSVLQLKG LFALTVNGDS
MIDSFIADGD MVLMEPVNEP ARLRNGTIVS AMVPGLGTTL KHFFRDGSLV RLEAANTSYD
PIEIDAEQVH IQGKLAAVWR KT