Gene PMN2A_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0807 
Symbol 
ID3606186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1309378 
End bp1310658 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content36% 
IMG OID637687671 
Productseryl-tRNA synthetase 
Protein accessionYP_292001 
Protein GI72382646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGATC AGAGACTTCT AAGAGAAAAT CCTAATTTAA TTTCGGAAGG GCTTAAATCA 
AGAGGAATGG ATGTTGACTT AGGACCTCTA CAAAAATTCT GCAAAGATCT TAAAGAGCTA
GAAGAAAAGA GAAATTCTCT ACAAGCACAG GGGAATTCAA TTGGGAAAGA GGTTGGACAA
AAAATAAAAC AAGGTCTTCC TCATGATTCT GAGGAGATTT CAAATCTTCG TGTTAAGGGC
AATCAAATCA AAAAACAAGT TGGAATAATT GAAGAGGAAG AGAAATCAAT TTCAAATAAA
TTAAATGAAC AAATCCTTTG CTTACCGAAT CTTCCAGAGA AGAATTCTCT GGAAGGGAAA
AACGAAAAAG ATAATAAGGA ACTAAGAAGA TGGGGAGAAC CTATTTCGGG AAATACTTTA
AAAGAGCATT GGGAAATTGC TAATCAATTA AACCTCTGGG ATAGTGAGAG ATCTTCTGTA
ATAGCAAAAA GTCGATTTGT AACCCTTTTT AAGCACGCTG CAAAACTTGA GAGATCACTT
ATAAATTTCA TGCTTGATTT ACATATTAAA AAAGGATATT TAGAAGTTCT TCCTCCAGCT
CTTGTTAACA CAGCCAGTCT TACTGGTTCT GGACAGTTAC CAAAATTTGC AGAAGAAAGT
TTTCGGTGTG CTGATGATGA TTTATGGCTG ACACCTACTG CTGAAGTTCC AATAACATCT
CTCCATCGTG GAGAGATCAT CCCTAGAGAT TTGCTGCCAT TAAGGTACGT TGCTTATAGC
CCTTGTTTCA GAAGAGAAGC GGGAAGTTAC GGAAGGGATA CGAGAGGTCT GATCAGACTT
CATCAATTCA ATAAAGTTGA ACTTTATTGG TTTTCTACTC CAGAAAGATC TGAAGATGCT
CTAGAACAAA TCACATCTGA TGCAGAGTCT GTGTTGCAAG AACTTGAACT ACCTTATCGA
GTAATTCAAC TTTGCACAGG CGACTTAGGT TTCTCAGCAA AAAAAACTTA TGATTTGGAG
GTTTGGCTTC CAGGTGCTAA CACTTTTAGA GAAATATCTA GTTGCAGTAA TTGTGGAGAT
TTTCAAGCTA GACGTTCATC AATACGAACA AAAGATAACA ATAAAAAAAA TATACTTTTG
CATACATTAA ATGGAAGTGG ATTGGCTATT GGTCGCACTA TGGCTGCGAT TTTGGAAAAT
GGTCAACAAA GTGATGGAAG TATCAATTTG CCAAAAGCCT TAATACCTTA CTTCGGTTCA
AACAAATTAA AGCCAGAATA A
 
Protein sequence
MIDQRLLREN PNLISEGLKS RGMDVDLGPL QKFCKDLKEL EEKRNSLQAQ GNSIGKEVGQ 
KIKQGLPHDS EEISNLRVKG NQIKKQVGII EEEEKSISNK LNEQILCLPN LPEKNSLEGK
NEKDNKELRR WGEPISGNTL KEHWEIANQL NLWDSERSSV IAKSRFVTLF KHAAKLERSL
INFMLDLHIK KGYLEVLPPA LVNTASLTGS GQLPKFAEES FRCADDDLWL TPTAEVPITS
LHRGEIIPRD LLPLRYVAYS PCFRREAGSY GRDTRGLIRL HQFNKVELYW FSTPERSEDA
LEQITSDAES VLQELELPYR VIQLCTGDLG FSAKKTYDLE VWLPGANTFR EISSCSNCGD
FQARRSSIRT KDNNKKNILL HTLNGSGLAI GRTMAAILEN GQQSDGSINL PKALIPYFGS
NKLKPE