Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0807 |
Symbol | |
ID | 3606186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1309378 |
End bp | 1310658 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637687671 |
Product | seryl-tRNA synthetase |
Protein accession | YP_292001 |
Protein GI | 72382646 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATAGATC AGAGACTTCT AAGAGAAAAT CCTAATTTAA TTTCGGAAGG GCTTAAATCA AGAGGAATGG ATGTTGACTT AGGACCTCTA CAAAAATTCT GCAAAGATCT TAAAGAGCTA GAAGAAAAGA GAAATTCTCT ACAAGCACAG GGGAATTCAA TTGGGAAAGA GGTTGGACAA AAAATAAAAC AAGGTCTTCC TCATGATTCT GAGGAGATTT CAAATCTTCG TGTTAAGGGC AATCAAATCA AAAAACAAGT TGGAATAATT GAAGAGGAAG AGAAATCAAT TTCAAATAAA TTAAATGAAC AAATCCTTTG CTTACCGAAT CTTCCAGAGA AGAATTCTCT GGAAGGGAAA AACGAAAAAG ATAATAAGGA ACTAAGAAGA TGGGGAGAAC CTATTTCGGG AAATACTTTA AAAGAGCATT GGGAAATTGC TAATCAATTA AACCTCTGGG ATAGTGAGAG ATCTTCTGTA ATAGCAAAAA GTCGATTTGT AACCCTTTTT AAGCACGCTG CAAAACTTGA GAGATCACTT ATAAATTTCA TGCTTGATTT ACATATTAAA AAAGGATATT TAGAAGTTCT TCCTCCAGCT CTTGTTAACA CAGCCAGTCT TACTGGTTCT GGACAGTTAC CAAAATTTGC AGAAGAAAGT TTTCGGTGTG CTGATGATGA TTTATGGCTG ACACCTACTG CTGAAGTTCC AATAACATCT CTCCATCGTG GAGAGATCAT CCCTAGAGAT TTGCTGCCAT TAAGGTACGT TGCTTATAGC CCTTGTTTCA GAAGAGAAGC GGGAAGTTAC GGAAGGGATA CGAGAGGTCT GATCAGACTT CATCAATTCA ATAAAGTTGA ACTTTATTGG TTTTCTACTC CAGAAAGATC TGAAGATGCT CTAGAACAAA TCACATCTGA TGCAGAGTCT GTGTTGCAAG AACTTGAACT ACCTTATCGA GTAATTCAAC TTTGCACAGG CGACTTAGGT TTCTCAGCAA AAAAAACTTA TGATTTGGAG GTTTGGCTTC CAGGTGCTAA CACTTTTAGA GAAATATCTA GTTGCAGTAA TTGTGGAGAT TTTCAAGCTA GACGTTCATC AATACGAACA AAAGATAACA ATAAAAAAAA TATACTTTTG CATACATTAA ATGGAAGTGG ATTGGCTATT GGTCGCACTA TGGCTGCGAT TTTGGAAAAT GGTCAACAAA GTGATGGAAG TATCAATTTG CCAAAAGCCT TAATACCTTA CTTCGGTTCA AACAAATTAA AGCCAGAATA A
|
Protein sequence | MIDQRLLREN PNLISEGLKS RGMDVDLGPL QKFCKDLKEL EEKRNSLQAQ GNSIGKEVGQ KIKQGLPHDS EEISNLRVKG NQIKKQVGII EEEEKSISNK LNEQILCLPN LPEKNSLEGK NEKDNKELRR WGEPISGNTL KEHWEIANQL NLWDSERSSV IAKSRFVTLF KHAAKLERSL INFMLDLHIK KGYLEVLPPA LVNTASLTGS GQLPKFAEES FRCADDDLWL TPTAEVPITS LHRGEIIPRD LLPLRYVAYS PCFRREAGSY GRDTRGLIRL HQFNKVELYW FSTPERSEDA LEQITSDAES VLQELELPYR VIQLCTGDLG FSAKKTYDLE VWLPGANTFR EISSCSNCGD FQARRSSIRT KDNNKKNILL HTLNGSGLAI GRTMAAILEN GQQSDGSINL PKALIPYFGS NKLKPE
|
| |