Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0806 |
Symbol | |
ID | 3606185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1307777 |
End bp | 1309255 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687670 |
Product | ATPase |
Protein accession | YP_292000 |
Protein GI | 72382645 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.438855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAATT GGGAGGAACA ACTTGATCTA CTAATTCGAG CTAGAACTCC AATTATTTGG ATAAGGAGTA ACGAAGAAGA AAGAGTTGAA ACTCTTTTAC AAAATTCTAC TAAAAGGCTT TCTCCAAGAA GACTTGCAAC TTGGGATTAC ATTGATGGAA TCAGTAATGT TCTTAATTCC AATAATCTTG GGTCAAGGCA GCCAATGGCC GTCCTTGAAT GGCTTAAAAA ACTGGATGAA AGTTCTCCTA CTATCCTTTT GCTTAAGGAT TTTCACCATT TTTGCGAAGA TCCAGGCATT CTAAGAATGC TAAAAAATCT AACTATTAAT CTTCGTTCCA AGCCTCATTC AATAGTTATA AGTTCTGGAT TATGGAGCCC CTCAAATGAT TTAGAAGAAG ATCTAACGAT TCTTGATCTT CCACTACCCA AGGAAAATGA AATCAAGACC CTTTTATCAA ATATTGCTCA AGCTAGTAAT TCTCAATTAG ACGAAAACGT TCTTAAGGAA CTTACAAATG CATGTGGTGG TCTAAGTGAA TCAAGGATCC GTAAAGTAGC CGCTAGGGCT CTTGCGCAAA GAGGTCAAAT TGGTAAAAAA GATTTAATAG AAGTACTGGA GGAAAAACGC CAATCTATTG CGCGTAGTGA AGTACTGGAA TATTGCAAAA CAAATAAGTC GCCAAATGAC GTTGGTGGTT TACAAATATT GAAAGATTGG TTGAAGCAAA GGAAACAAGC CTTCTCCGAA GAAGCAAAAG ATTTTGGATT ACCTTTACCT AAAGGTGTTT TATTAGTTGG CCCTCAAGGG ACAGGAAAAA CTCTAGTAGC GAAAGCAATA GCGAATAGCT GGTCTATGCC CTTGTTAAGA CTTGATGTAG GCAGATTATT TGCTGGATTA GTTGGAGCCA GTGAAGCACG GACAAGGGAG ACCATTCAGC GAGCCGAAGC TATGGCACCT TGCATTTTAT GGATTGACGA AATTGACAAA GCTTTTGGCG GAGATGGGAG GAGTGACGGA GGAACCAGTC AAAGAGTGCT TGCAAATATT CTTACGTGGA TGTCAGAAAA AACTTCTTCT GTCTTTCTTG TAGCCACTGC AAATGGAATA GATAAACTTC CTCCTGAACT ACTTAGGAAA GGAAGATTTG ATGAAATTTT CATGCTGGAA TTACCCTCCA GGAATGAAAG ACATAGCATT CTTGAACTTC ATCTTCAAAA ACGAAGACCT AATTTAAAAA TTGATTTAAA TGCTGCTTTG GATAGAACAG AGGGATTCTC TGGTGCTGAA TTAGAACAAT CCGTTATCGA GGCAATGTAC TTTGCATTTG CAGAGAAAAG AGAGCTTGTT GAAGGTGATT TAATTCTCGC TACAAGTCAA CTAGTTCCTC TTTCAAGAAC TGCAAGAGAA CAACTTGAAT CTTTAAGAGA ATGGGCTTCT AGCGGAAGAG CAAGAGCTTC ATCTCCAAAA CTTTTTTAG
|
Protein sequence | MSNWEEQLDL LIRARTPIIW IRSNEEERVE TLLQNSTKRL SPRRLATWDY IDGISNVLNS NNLGSRQPMA VLEWLKKLDE SSPTILLLKD FHHFCEDPGI LRMLKNLTIN LRSKPHSIVI SSGLWSPSND LEEDLTILDL PLPKENEIKT LLSNIAQASN SQLDENVLKE LTNACGGLSE SRIRKVAARA LAQRGQIGKK DLIEVLEEKR QSIARSEVLE YCKTNKSPND VGGLQILKDW LKQRKQAFSE EAKDFGLPLP KGVLLVGPQG TGKTLVAKAI ANSWSMPLLR LDVGRLFAGL VGASEARTRE TIQRAEAMAP CILWIDEIDK AFGGDGRSDG GTSQRVLANI LTWMSEKTSS VFLVATANGI DKLPPELLRK GRFDEIFMLE LPSRNERHSI LELHLQKRRP NLKIDLNAAL DRTEGFSGAE LEQSVIEAMY FAFAEKRELV EGDLILATSQ LVPLSRTARE QLESLREWAS SGRARASSPK LF
|
| |