Gene PMN2A_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0798 
Symbol 
ID3606177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1302601 
End bp1303551 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID637687662 
ProductSMR family transporter PecM 
Protein accessionYP_291992 
Protein GI72382637 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTCA TTTGGAATTG GTTTTTGATG ATTTTGCCCT TCGCTCTTTG GGGGACCTCA 
ATGGCGGCGA TGGCACCTTT GGTTAATGCC GCGGGACCTG AGATTGTAGC CTCACTAAGG
CTTTTGCCTG CTGGTCTAGT AGTTTTAGCT TCAGTTCCTT TCTTGAAGAG GAGTTGGAAT
ATTTCAAAAG ATGATTTGGT GTGGTTTTTA GTATTTACTT TGATTGACGC AACCCTTTTT
CAGATTTTTC TAGCCAAAGG GTTAATGGAA ACTGGCGCAG GATTGGGTTC TGTTCTTATA
GATTCCCAAC CTTTGATGGT TGCTTTGTTA GCAAGAATTC TGTTTGGAGA TGCAATTAAT
CCAATTGGAT GGATTGGCTT GGTGCTTGGC TTGGTTGGAA TAATTTGTCT TGGAGTCCCT
ACTGAATTAC TAGGAAATTG GTTTTTACTT GGCAACTTTG AATCAGGAAG TAATTTTTTA
AGCCATGGAG AAGTATGGAT GATATGCGCA GCAACCTCGA TGGCTTTAGG GACGGTGCTT
ATTCGATTTG CTTGTAGAAA AAGTGATCCT GTTGCTGTAA CTGGATGGCA CATGGTTCTA
GGAAGTGTTC CTCTTATCGT TTGGCATGTT TTCGATAAAA ACTGGCCATT GTTTCCAGAC
TGGTCTGCTT TTGAATGGAC TTTGATGTCT TATTCAAGTT TGTTTGGTAG CGCATTGGCC
TATGGATTAT TTTTTTGGTT TGCAAGTCGA AAAGAATTAA CAAGCTTTAG CACCCTTGCA
TTTTTAACGC CTGTATTTGC CTTGATTACT GGCGGGATTT GGTTAGGGGA GAGACTTTTT
CTCCTTCAGT GGATTGGAGT AGTTTTGGTT TTAATATCAG TACTATTTGT AAGTCAGAGA
CGAAGATTCT GGGGGAATAA AAGTGATAAT GAATTAATAA AAGAGGCTTA G
 
Protein sequence
MFVIWNWFLM ILPFALWGTS MAAMAPLVNA AGPEIVASLR LLPAGLVVLA SVPFLKRSWN 
ISKDDLVWFL VFTLIDATLF QIFLAKGLME TGAGLGSVLI DSQPLMVALL ARILFGDAIN
PIGWIGLVLG LVGIICLGVP TELLGNWFLL GNFESGSNFL SHGEVWMICA ATSMALGTVL
IRFACRKSDP VAVTGWHMVL GSVPLIVWHV FDKNWPLFPD WSAFEWTLMS YSSLFGSALA
YGLFFWFASR KELTSFSTLA FLTPVFALIT GGIWLGERLF LLQWIGVVLV LISVLFVSQR
RRFWGNKSDN ELIKEA