| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0767 |
|---|
| Symbol | |
|---|
| ID | 3606145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1275537 |
|---|
| End bp | 1276613 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637687630 |
|---|
| Product | photosystem II reaction centre protein PsbD/D2 |
|---|
| Protein accession | YP_291961 |
|---|
| Protein GI | 72382606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG CTGTTGGAAG CGCAACAGAA CGAGGTTGGT TTGACGCCCT CGATGACTGG
TTAAAGCGCG ACCGATTCGT ATTTGTTGGT TGGTCTGGAC TACTACTCTT CCCTACGGCT
TTCCTAGCTA TTGGTGGATG GTTTACAGGT ACAACCTTCG TTTCTTCCTG GTACACCCAT
GGTGTAGCCA GTTCTTACCT TGAGGGATGC AATTTCCTCA CAGCCGCTGT TAGTACTCCT
GGCGATGCCA TGGGTCACAG TCTTCTATTC CTTTGGGGAC CAGAAGCTCA GGGCGATTTA
ACACGTTGGT TCCAACTTGG TGGCCTTTGG AATTTCGTTG CTCTTCACGG CGCGTTTAGT
CTTATCGGCT TCATGCTTCG TCAATTCGAA ATTGCCAGAC TAGTTGGTAT CCGTCCATAT
AACGCACTTG CTTTCTCAGC AGTTATTGCA GTATTTACTG CTTGCTTCCT TATCTATCCA
TTAGGACAGC ACAGTTGGTT CTTCGCTCCT TCTTTTGGAG TTGCAGCAAT ATTCCGTTTC
ATCCTCTTCA TTCAAGGATT TCACAACATT ACGCTTAACC CATTCCACAT GATGGGAGTA
GCAGGAATTC TTGGTGGTGC TCTTCTTTGT GCTATTCACG GTGCAACAGT TCAGAACACT
CTTTATGAAG ATTCAAGTCA GTACTCTGAA GGTAAAGCTC AGAGTTCTAC TTTCAGAGGT
TTCGATCCAG TTCAAGAAGA AGAAACTTAC TCATTTATTA CAGCAAACCG TTTCTGGAGT
CAGATTTTCG GAATTGCTTT CTCAAATAAG CGTTTCCTCC ACTTCTTGAT GCTCTTCGTA
CCAGTAACAG GTATGTGGGC TGCATCAATT GGAATCGTTG GATTAGCTCT AAACCTTCGT
GCTTACGACT TTGTTAGCCA AGAAATCAGA GCTGCTGAAG ATCCTGAATT CGAAACTTTC
TACACAAAAA ATATCCTTCT TAATGAAGGT ATGCGTGCAT GGATGTCTTC TGTAGACCAA
CCACACGAAA ACTTTGTATT CCCTGAGGAG GTACTCCCAC GTGGAAACGC CCTTTAA
|
|---|
| Protein sequence | MTIAVGSATE RGWFDALDDW LKRDRFVFVG WSGLLLFPTA FLAIGGWFTG TTFVSSWYTH
GVASSYLEGC NFLTAAVSTP GDAMGHSLLF LWGPEAQGDL TRWFQLGGLW NFVALHGAFS
LIGFMLRQFE IARLVGIRPY NALAFSAVIA VFTACFLIYP LGQHSWFFAP SFGVAAIFRF
ILFIQGFHNI TLNPFHMMGV AGILGGALLC AIHGATVQNT LYEDSSQYSE GKAQSSTFRG
FDPVQEEETY SFITANRFWS QIFGIAFSNK RFLHFLMLFV PVTGMWAASI GIVGLALNLR
AYDFVSQEIR AAEDPEFETF YTKNILLNEG MRAWMSSVDQ PHENFVFPEE VLPRGNAL
|
|---|
| |