Gene PMN2A_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0707 
Symbol 
ID3606085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1203992 
End bp1205230 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content30% 
IMG OID637687570 
Productmajor facilitator superfamily permease 
Protein accessionYP_291901 
Protein GI72382546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.745936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGT TCTCAACTTC TAGTGTTAGA AATTATTGGG AGAAATTCCC TATATCCCTA 
AGACTAATCA TAAAAGCTCG TTTGTGGACA GGGATAGGAG CAGGAGGGGT ATTATATTTA
AGTCCGATAA TATTCAATAG TTTAGGTTTT TCAGCAGAGC AAATCGGTAG AGGAATAACC
ACAGCTGCAT TTGCTGGAAT AACGACAAGA TTTGGTACGG GATATTTACT TGACAAAAAA
TTTAGCTCTA TAAAAACAAT TAAAGTTGCA TGTTTATTTG CAATTTTATC GGATTTTATA
CTTTTTTATT CGCAAAATTT CTTAGCTTTC CTTTGTGGTC AGTTTTTCTT AGGAGCTGCA
GCTGGAATAT ATTGGCCTTC TGCTGAATTA GCTATTCCAC TAAATTGTAA TACCAAAATA
AAATCAAGTG AAGGTTATTC TCTTGCAAGA AGTGCTGATG CAATTGGAGT CACATTAGGA
GTCTTACTAG GTACTATAGG ATCTTATTTT GAATTCACAA GAATAATATA TTTGTTAGAT
ATTTTATGCA TGTTATATAT ATTAAATATA TTATTAAATA AGCTAGGCAT AAGTAGAAAG
AAAATCGCTT TCAAGATCAA AGACGATTCA GATATTAAAT ATAAATCTCT AGAAAAAAAA
TATAATCTAA AATGGATAAT AAATTTATTA CCTTTATTAT TAATAACTCT ATTTGTGACA
GGAGTAATGA GTTTATTGCA AAGCATCCTT CCGATAGATT TAGCGAACGG AGGTATAATA
AGGCAATCAT TCACAGACCA AAAAGTAGCT ACATTATTAA CAATAAAACT AATTTTACTT
GCTATTTTTC AATGGCCAGT CGGTTATATT TTAAGAAATA AAAATTCACC TTTTAAATTC
AGATTATGCT TAATATCGCT ACTCATAGGT TTTATTTTTT TATCACTTTC AAATTTCTTA
CTTGACGGAT ATCTATTAAT ACTTATAGCT TTCATACCAC TAACAATATC TCTATGTATA
TTTCTACCCT CTGCTTCAAA TGCAATTATA AAGTCTGCTC CAATTAAATA TCAAGGTTCA
GCAATAGCCT TATATTCTCA ATGTTTTGGC ATTAGTTCTT TAACAGTACC TTGGATGGCA
GGAAAATTAA TTGATACCCA TGACACAGCC CTTCAGCTAT GGTTAATTGT TAGTATTATT
TGTATACTTT TAGTACCAAT ATCTAAGAAT ATTAAATAA
 
Protein sequence
MNLFSTSSVR NYWEKFPISL RLIIKARLWT GIGAGGVLYL SPIIFNSLGF SAEQIGRGIT 
TAAFAGITTR FGTGYLLDKK FSSIKTIKVA CLFAILSDFI LFYSQNFLAF LCGQFFLGAA
AGIYWPSAEL AIPLNCNTKI KSSEGYSLAR SADAIGVTLG VLLGTIGSYF EFTRIIYLLD
ILCMLYILNI LLNKLGISRK KIAFKIKDDS DIKYKSLEKK YNLKWIINLL PLLLITLFVT
GVMSLLQSIL PIDLANGGII RQSFTDQKVA TLLTIKLILL AIFQWPVGYI LRNKNSPFKF
RLCLISLLIG FIFLSLSNFL LDGYLLILIA FIPLTISLCI FLPSASNAII KSAPIKYQGS
AIALYSQCFG ISSLTVPWMA GKLIDTHDTA LQLWLIVSII CILLVPISKN IK