Gene PMN2A_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0705 
Symbol 
ID3606083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp1201396 
End bp1202418 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content33% 
IMG OID637687568 
ProductABC-type oligopeptide transport system permease 
Protein accessionYP_291899 
Protein GI72382544 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.797816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCAACTA AAAAGGCCCT TTTCAAATAT ATCCTTTCAA GATTAACTCT ATTGCCAATA 
ATGCTTTGGA TCATTTCGAG CTTAGTTTTT ATATTGTTAA GAATTGCCCC AGGCGATCCG 
GTAGATGCAA TTCTAGGCAC TCGAGCGAAT GAATTTGCAA GGGAAAGCCT AAGAATTAAA 
CTTGGATTAG ATAAACCTCT AATTAATCAA TATATTGAAT ATTTAAATCA ATTAATTCAT 
GGAAATTTAG GAATCTCATT AAACACACAA GAACCTGTAA AAGTAATTAT TTCAAAGGCT 
CTTCCAGCAA GTTTGGAATT AGCTATATTT TCAATATTAA TAGCATCATT ATTAGGTTAT 
TTAATTGGTT TTTTAGGAGC AGTTAAGCCA GAAAGCAAAA TAGATTTTTC AGGAAGGATT 
TTTGGCATTG GTACCTATGC TCTCCCCCCT TTCTGGGCAG CAATGTTAAT TCAAATTATC 
TTCGCTGTTT TTTTAGGTTG GTTACCCATT GGTGGAAGAT TACCTCCTGG AGCTATCCCT 
CCGCCCCCAA TCACTGGTTT CTTACTTTTA GATAGTATTT TAGATAAAAA CGTTGAAATC 
ATTTTTAATT CTATTCAACA TTTAATATTA CCCTCCGTCA CTCTAGGGAT CTTATTAAGC 
GGAATATTTA GTCGAGCATT AAGATTAAAT CTAGAAGAAA TTTTAAAAAA AGATTACATT 
GAAGCCGCCA AAAGTAGAGG TATAAATAAC TCCAGAGTAT TAGTTAAACA TGCCTTACCA 
AATACTCTTC TCCCAATATT GACAATTACT GGCTTAACAG TTTCTTCTTT AGTTGGTGGA 
GCACTTTTAA TTGAAATAAC ATTCTCATGG CCTGGAATAG CTCTTGGACT TCAAGAAGCT 
ATAAATCAAA GAGATTATCC TGTTGTACAA GGAATAGTTG TTGTAATATC TAGCCTTGTT 
GTAATGATTA GTGTTTGTAT AGATATCGCT ATTGCATATA TTGATCCAAG GGTTAGTTAC 
TGA
 
Protein sequence
MSTKKALFKY ILSRLTLLPI MLWIISSLVF ILLRIAPGDP VDAILGTRAN EFARESLRIK 
LGLDKPLINQ YIEYLNQLIH GNLGISLNTQ EPVKVIISKA LPASLELAIF SILIASLLGY 
LIGFLGAVKP ESKIDFSGRI FGIGTYALPP FWAAMLIQII FAVFLGWLPI GGRLPPGAIP 
PPPITGFLLL DSILDKNVEI IFNSIQHLIL PSVTLGILLS GIFSRALRLN LEEILKKDYI 
EAAKSRGINN SRVLVKHALP NTLLPILTIT GLTVSSLVGG ALLIEITFSW PGIALGLQEA 
INQRDYPVVQ GIVVVISSLV VMISVCIDIA IAYIDPRVSY