Gene PMN2A_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0689 
Symbol 
ID3606067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1187028 
End bp1189646 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content37% 
IMG OID637687552 
ProductDNA gyrase subunit A 
Protein accessionYP_291883 
Protein GI72382528 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.39823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC CATTGGGACC TAATAGTACT GGTCCTGGGG AATCCGACGA TCGGATCATT 
CAGACAGACT TAAGAAACGA AATGTCGCGT TCCTATTTGG AATACGCGAT GAGTGTGATT
GTTGGGAGAG CTTTACCTGA TTCAAGAGAT GGACTTAAAC CAGTTCACAG AAGGATTCTC
TATGCGATGT ATGAACTTGG ACTTACTAGC GATAGACCTT ACCGGAAATG CGCACGTGTG
GTTGGAGAAG TTTTAGGTAA ATTCCATCCT CATGGTGATA CCGCCGTTTA TGACGCCTTG
GTCCGAATGG CGCAAGATTT TTCCATGCAG ATGCCTTTAA TAGATGGGCA TGGGAATTTT
GGATCTGTTG ATAATGATCC TCCTGCCGCA ATGAGATATA CAGAATCCAG ATTACAATCT
TTGACTACAG ACAGCTTGCT TGAAGATATT GAATCTGAAA CAGTTGATTT CGCCGATAAC
TTTGATGGAT CAGTACAAGA ACCAACAGTA TTACCGGCAA GAATTCCACA ATTGCTTTTA
AATGGTTCTT CTGGAATAGC TGTAGGTATG GCAACTAACA TACCTCCACA TAATTTGGTC
GAATTGATTG ATGGATTGAT GGCTTTAATT TCTAATCCTG AGTTAGAAGA AATAGATTTG
ATGAATATAA TTAAAGGTCC AGATTTTCCG ACCGGTGGTC AGATCCTTGG CAGGAGTGGA
ATTAAGGAAA CATATCTTTC TGGGAGAGGT TCAATCACTA TGCGTGGAGT GGCTGAAATA
GAAACAATTG AAAATCCAGG GAGACCTGAT AGGGACGCAG TGATAATTAC TGAACTTCCT
TATCAAACAA ATAAAGCAGG ATTAATTGAA AGAATCGCTG ATATGGTGAA CGATAAAAAA
CTTGAAGGTA TTGCAGACAT TAGAGATGAA AGTGATAGAG ATGGTATGAG AATTGTTGTT
GAATTAAGAA GAGATTCATA TCCTCAGGTT GTTTTAAATA ATTTATTTAA ACTTACTCCT
TTACAGACTA ATTTTAGTGC AAATATGCTT GCATTAGTTA ATGGTGAGCC TGTTATATTG
TCACTTAGAA AGATGTTGCA GGTATTTTTA GATTTTAGAG TAGAAACTAT TGAGAAAAGA
ACAAAATATC TTTTAAAGAA GGCGGAGAGT AGAGATCATA TATTATTAGG ATTATTATTA
GCTTTAGATC AGCTAGATGA AATAATTAGT CTTATCAGAT CAGCATCAGA TTCGACTACA
GCAAAAAATA AATTACAAGA ACTTCATGGC TTAACAGATA TTCAGTCTGA TGCTATTTTG
CAGATGCAGT TACGAAGACT GACCGCTTTA GAGGCAGATA AGATAAGACT TGAACATGAG
GATTTAGTTA AAAAAATAAC AGATTTAAAA GATATTTTGA ATAAGAAAGA AAGGGTATTT
GAAATAACAA AAATAGAATT AAATGAAATA AAAGAAAAAT ATAATACCCA AAGAAGAACA
GAGATTCTCG ATCTTGGCGG AGGCCTTGAG GATATTGATT TAATTGCGAA TGAAAGATCA
GTTGTTTTGT TGACCGAGAC AGGATATTTA AAGAGGATGC CTGTTAATGA ATTTGAAGCA
ACAAGTCGAG GTACTAGAGG TAAAGCAGGA ACGCGAAGCC AAGGAGAGGA AGAGGTGAAA
AAATTTATTA GTTGTAATGA CCATGACAGC CTTCTCCTTT TTAGTGATAG AGGTATTTCT
TATGCTCTTC CTGCTTACAG AGTTCCTCAA TGTAGTAGAA CTGCAAAAGG GACACCTATT
GTTCAATTGC TTCCAATTCC GCGTGAAGAA GCTATTACTT CATTGCTTTC TGTGAGTTCT
TTTGATGATG AAAACTATTT ATTGATGCTT ACTAGAGGGG GGTATATAAA AAGGACACCT
CTTTCAGCTT TTAGCAAGAT CAGAGCAAAT GGCCTAATTG CTATAGGTTT AGAGGATGGT
GATGCTTTGA CTTGGGTTCG ACTGGCTGAG TCTGGAGATA GTGTTTTGAT TGGTTCCAAA
AATGGAATGA CAATACATTT TAGATTAAAT GATTCTGAAT TACGCCCTTT AGGAAGATCA
GCAAGAGGGG TCAAGTCAAT GAATCTTAAG TCTGGAGATT CACTTGTAAG TATGGATGTT
TTGTCTACTG AGTTGGCTGA TCATGTTGAT AAAAGTGAAG AAGATGAACT ACATAGTGAA
TCATCAGAAT CTGAAGGTCC TTGGGTACTT GTTGCCTCTG CAAGCGGACT AGGGAAAAGA
GTTCCTATGA CACAATTTCG CTTGCAAAAA AGAGCCGGAA TGGGGTTAAG AGCTATAAAA
TTCAGGAAAG ATGGAGATGA ACTTGTAGGT TTAAGGGTTC TGGGTAAAGG AGAAGAATTA
TTATTAGTTA GTGAAAGAGG AGTAATTGTT AGAACTAGCG CAGATAAAAT CTCTCAACAA
TCCAGAGCTG CAACCGGCGT AAGAATTCAA AAGCTTGATA ATGGCGATAA GTTATCGGAG
GTTGTTTTAG TTCCCCCAGA GCAAATTAAT GATGATGATG AGAATCAATC ATCATCAACT
AAGGAATCAA TAAATACTGA TCCAACGTCA AAAAATTGA
 
Protein sequence
MADPLGPNST GPGESDDRII QTDLRNEMSR SYLEYAMSVI VGRALPDSRD GLKPVHRRIL 
YAMYELGLTS DRPYRKCARV VGEVLGKFHP HGDTAVYDAL VRMAQDFSMQ MPLIDGHGNF
GSVDNDPPAA MRYTESRLQS LTTDSLLEDI ESETVDFADN FDGSVQEPTV LPARIPQLLL
NGSSGIAVGM ATNIPPHNLV ELIDGLMALI SNPELEEIDL MNIIKGPDFP TGGQILGRSG
IKETYLSGRG SITMRGVAEI ETIENPGRPD RDAVIITELP YQTNKAGLIE RIADMVNDKK
LEGIADIRDE SDRDGMRIVV ELRRDSYPQV VLNNLFKLTP LQTNFSANML ALVNGEPVIL
SLRKMLQVFL DFRVETIEKR TKYLLKKAES RDHILLGLLL ALDQLDEIIS LIRSASDSTT
AKNKLQELHG LTDIQSDAIL QMQLRRLTAL EADKIRLEHE DLVKKITDLK DILNKKERVF
EITKIELNEI KEKYNTQRRT EILDLGGGLE DIDLIANERS VVLLTETGYL KRMPVNEFEA
TSRGTRGKAG TRSQGEEEVK KFISCNDHDS LLLFSDRGIS YALPAYRVPQ CSRTAKGTPI
VQLLPIPREE AITSLLSVSS FDDENYLLML TRGGYIKRTP LSAFSKIRAN GLIAIGLEDG
DALTWVRLAE SGDSVLIGSK NGMTIHFRLN DSELRPLGRS ARGVKSMNLK SGDSLVSMDV
LSTELADHVD KSEEDELHSE SSESEGPWVL VASASGLGKR VPMTQFRLQK RAGMGLRAIK
FRKDGDELVG LRVLGKGEEL LLVSERGVIV RTSADKISQQ SRAATGVRIQ KLDNGDKLSE
VVLVPPEQIN DDDENQSSST KESINTDPTS KN