| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0679 |
|---|
| Symbol | |
|---|
| ID | 3606057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1175475 |
|---|
| End bp | 1176935 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637687542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_291873 |
|---|
| Protein GI | 72382518 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAGG TAAAACCAAA AGAAGATCGT GTTGTTTTAA CTAAGGATCA AGAAAAATCT
CTTCAAATTT TCTGTGAATG GCTAGAGGCC CCGTATTCCT TTAAGCCCTT TGTAATGAAA
GGCTTTGCAG GTAGCGGAAA AACATATTTA TCGATGAAAT TATTAAAAAA GGTCGATCAG
TTAGGTTTGT GTTGGACAGT AGTTGCACCA ACTCATAAAG CGGTAGGTGT ACTAAGGGAG
GGGTTGAAAA ATGAATCTAT TCAACCCACA TGGTTCCCCT CTACTATTCA CCGTTTGCTT
CGACTTAAGT TAAAGAGACA GGCGGATATA GAAATATGTG AAAAAACAGA TCAAACAGAG
AGCTCTTTGG AGAATTTAGG ACTTGTTTTA ATTGATGAAG CATCAATGAT TGATTCCAAA
TTATTGGAGA TAACTCTTGA ATGCGCAAGA TGCAATTCGA CTCGTTTGGT TTTTGTTGGC
GATCCTGCTC AACTACCACC AGTGGGAGAA AGTACTAGCT CAGTTTTTTT AATGAAAAGA
GCTGTAAATA CTGAACTTAG GGAAGTTGTT CGTCATCAAG GGCCTGTTCT GAAATTGGCA
AAAGTAATTA GAGACGGGCA AATCCCTTGT ATGCAACCAC CATTAGTAAA GGTTATTAAT
TCTAAGAAAG GTAATGTTGG AATATTAGAT AGAACAAGTT GGCTTGAAAG AGCTAAATTA
GCATTGAGGT TATCTTCCTT AGAGGATGAT CACGATAGAG CAAGAATTTT GTGTTATACG
AACCGTATTG TTGATAATTT AGTTCCTCAT GCAAGAAGAG CTATACATGG TGAGATGGCA
GATCAATATC AGGTTTTACC TGGAGAGGTT TTAATAAGCC GTAAAGCTGT AATGGTAAAT
GCGTCTTTAA ATGTGGATGA GCTGGGTGAA GAACCAGATA TTTTGATTAG TTCCAATAGA
GAGATGGTGG TAGAAGATGT TATTCCAAAT AGTTTTGACT TGGCCTCTTT AGGAATCCAT
CAAGATTTTG AAAACCCTTT ACCAGTTATT GAAACTCAGG TAGCTAAAGT TAACTGCGAT
CAAAAAGAAT TTTCTTTGAG GTTAATGCCT CAAATAGGTT CTAAAGCTCG TAAAGATTTG
GATCTTTCTT TGAATGAATT GAGCAATTTG GCAAGAGAGA GAGGACGAAA AAATAGTGCC
TCGACTTGGA AACTTTTCTT TTTTATCAGA GATTCATTCG CCTCTTTAGG TCCTGCTTCC
GTACTTACAA TACACAGGAG TCAAGGAAGT ACTTTTGGAG AAGTGTTTAT AACTTCTGAT
GCCTTTTGGC CGAAAGATCT TGAATTTAGA AGAAGGCTTG TATATGTTGC TGTAAGCAGA
GCGAGTAAAG GAGTATGGAT CGTTGGTGAT AATAAAAGCA AGATGAATCA AGCTCTTTTA
GAGAAATTAT TAATGGATTG A
|
|---|
| Protein sequence | MKEVKPKEDR VVLTKDQEKS LQIFCEWLEA PYSFKPFVMK GFAGSGKTYL SMKLLKKVDQ
LGLCWTVVAP THKAVGVLRE GLKNESIQPT WFPSTIHRLL RLKLKRQADI EICEKTDQTE
SSLENLGLVL IDEASMIDSK LLEITLECAR CNSTRLVFVG DPAQLPPVGE STSSVFLMKR
AVNTELREVV RHQGPVLKLA KVIRDGQIPC MQPPLVKVIN SKKGNVGILD RTSWLERAKL
ALRLSSLEDD HDRARILCYT NRIVDNLVPH ARRAIHGEMA DQYQVLPGEV LISRKAVMVN
ASLNVDELGE EPDILISSNR EMVVEDVIPN SFDLASLGIH QDFENPLPVI ETQVAKVNCD
QKEFSLRLMP QIGSKARKDL DLSLNELSNL ARERGRKNSA STWKLFFFIR DSFASLGPAS
VLTIHRSQGS TFGEVFITSD AFWPKDLEFR RRLVYVAVSR ASKGVWIVGD NKSKMNQALL
EKLLMD
|
|---|
| |