Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0671 |
Symbol | pepN |
ID | 3606048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1164418 |
End bp | 1167039 |
Gene Length | 2622 bp |
Protein Length | 873 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637687533 |
Product | aminopeptidase N |
Protein accession | YP_291865 |
Protein GI | 72382510 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.17366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACTC AGAAATCTAT TAAATTATCA GACTATGTTG AATATCCTTT CTTAATACCC AGTATATATT TAGATTTTGA TATCGGTACG GATTACGTTG TTGTTCAATC TTCAATGATA ATTAAGCCAA AGAAGAAAGA ATCTTCAAAG CTTGTTCTTA AGGGTAATCA AATTAAATTA TTATCAATAT CAATAAATGG AAAAGAATTG AAGTTGCCTG AATATTCTAT TTCCGATAAA GGCTTGATTA TACATAGTCC TCCAGGATCA GAATTTGAAT TAAAAATAAG ATCTCTAATA GATCCTTTTA GAAATACATC ATTAGAAGGA TTATATTTAA GCTCAGGAAT GTTAACTACT CAATGTGAGG CAGAAGGGTT TAGAAGAATT TGTTTTCATC CAGATAGGCC AGATGTTTTA AGTAGATATA CAGTAAGAAT AGAGGCAGAC AGAACTTTGT ATCCTATATT ATTATCTAAT GGGAATGAAA AGTATTCAGG TAATTTAAAT AGTAATAATC TTAGACATGA ATTTATATGG GAAGATCCAT TCCCAAAACC TTGCTATTTA TTCGCTTTAG TTGCTGGTAA ATTAAATTCA GTCTCAGATA CATATATTAC AAATACGGGA AGATTAATTG ATATTAGAAT TTATGTGGAA AAAGGAGATG AGAAATATAC AAAACATGCC GTTAACTCAC TAATAAAGGC AATGAAATGG GATGAGGAAA ATTACGGTCT TGAATATGAT TTAGATGAGT ATAAAATTGT TGCTGTAAGG CATTTTAATA TGGGAGCGAT GGAAAATAAG GGACTAAATA TTTTTAATTC CAAGTTGGTA TTAGCTGACT CAAAGACTGC GACTGATGAT GAATTAGAGA GAATAGAAAG TGTTATAGCA CACGAATATT TTCACAATTG GACTGGCAAT AGAATTACAT GCCGTGATTG GTTTCAGCTT TCATTAAAAG AAGGTCTGAC AGTTTTTAGA GATCAATCTT TTACCTCAGA TCTACATAGT AAAGGACTAA AAAGAATAGA AGATGTATCA TTTCTTAGAA ATTTTCAATT TGCTGAAGAT AAGGGTCCTA CCTCTCATGC GGTTAAGCCT AAAGAGTATG TAGCGATCGA CAATTTTTAT ACAACAACAA TATATGAGAA GGGTGCTGAG TTGATAAGAA TGCTTGAGCT ATTGCTAGGA AAAGAAAAGT TTTTTAGAGG TATTAATCTC TATATTAGAA CTTTTGATGG TAGTGCCGCT ACAACTGAGG ATTTTATTAA TTCATTAATA AAAGGTGCTT ATTTGGAAGA AAAAAACTGT CCTTTTGATT TAGATAAATT TCTTAATTGG TATTATAAGT CAGGTACACC GAAAGTTTAT ATAAATCAAT CTTGGGATTC AAAGAATTCA ATTTTGAATG TCTCTTTTGA GCAGAAGATA GATAGCGAAA AAACTAGTGA AAATACGGAA ATGGTTATTC CAATTCTTTA TTCTTGCTAT AGCAGAGAAA AAGGTGCTAG TCCTATAGCT GAGGATAATT TATTTATTTT AGACAAAAAT AAGAAAAATC TAAAAATACA TACTCTCCCA GGTGAGAAAG AGGCTCCAGT TCTATCACTT TTTAGACGAT TTTCTTCACC TGTTGTTTGG GAATCTGATT TGCTTATAGA TGACTATCTT TTCCTTTTCT TAAATGACAA TGATTATTTT TCGAGGTGGG ACTCTGGTCA GTATTTGATG CGTGAAATTT TGAAGACTAG GCTTTGCAAT AAAGCCAATT ATTCATTGGA AGATAGGTTT ATTAATGCTA TTAAACAAAC CATAAAATCC TTAGAAATTA ATGATCCTTT TTTCTTAGCA ACTCTTATAG CAATACCTGG TTTTGCAGAA TTGGAATCCT TATTCACAAA AGTTGATCCA ATAAGAATTT ATAGAGAATC AATAGATTTC CAAGTTTTAA TTGGTAATGA AATTCTTCAA GAGCTAAGAA TAATATCTAA AAATTTATTA GTTAATATTG ATCATCAATG GCCAATGGGT AGAGGAGAGA GAAAACTACT AGGGACTATA TGGTTTTATT TATCTCTTGC GGGCGATATA GATGTGCAAA AAAATTGTGT TGAATCAATT AGTCATTCTT CAATGACAAT ATCAAGGGCG GCTTTAGGAG CATTAAAACC ACTCGATAAC ACATTGACCG AAGAAGCTTC TAATCTGTTT TATAACCTTT GGAAAGAAAA TCCAGTGGTC TTAGACTCAT GGTTCGCTTA TGAGGCCTCA AGACCTCATA AGCGAGGAAT TAATGTGATT GAAAAATTAC TATCACATCC TAAATTTGAT TGGAAGGCTC CAAATGCCAT ACGAGCTGTT CTCGGAGGAT TTAGTAAAAA TATTGATTTA TTTCATTCTC TTGATGGACA AGGTTATTTA TTTATGGCAG ATAAATTAAT AGAGGTAGAT AAAATTAACC CAATAACGGC TTCAAGAATG GTAAAAGTTT TTAGTAAATG GAAAACTTAT ATAAATAAAA ATAAGGAAGG GATGTATGAA TCACTATTAA AATTAAATAA AGCAAATATA TCTTCTAATA CAAGAGAGGT AGTGGAACTG ATTTTGAATT AA
|
Protein sequence | MSTQKSIKLS DYVEYPFLIP SIYLDFDIGT DYVVVQSSMI IKPKKKESSK LVLKGNQIKL LSISINGKEL KLPEYSISDK GLIIHSPPGS EFELKIRSLI DPFRNTSLEG LYLSSGMLTT QCEAEGFRRI CFHPDRPDVL SRYTVRIEAD RTLYPILLSN GNEKYSGNLN SNNLRHEFIW EDPFPKPCYL FALVAGKLNS VSDTYITNTG RLIDIRIYVE KGDEKYTKHA VNSLIKAMKW DEENYGLEYD LDEYKIVAVR HFNMGAMENK GLNIFNSKLV LADSKTATDD ELERIESVIA HEYFHNWTGN RITCRDWFQL SLKEGLTVFR DQSFTSDLHS KGLKRIEDVS FLRNFQFAED KGPTSHAVKP KEYVAIDNFY TTTIYEKGAE LIRMLELLLG KEKFFRGINL YIRTFDGSAA TTEDFINSLI KGAYLEEKNC PFDLDKFLNW YYKSGTPKVY INQSWDSKNS ILNVSFEQKI DSEKTSENTE MVIPILYSCY SREKGASPIA EDNLFILDKN KKNLKIHTLP GEKEAPVLSL FRRFSSPVVW ESDLLIDDYL FLFLNDNDYF SRWDSGQYLM REILKTRLCN KANYSLEDRF INAIKQTIKS LEINDPFFLA TLIAIPGFAE LESLFTKVDP IRIYRESIDF QVLIGNEILQ ELRIISKNLL VNIDHQWPMG RGERKLLGTI WFYLSLAGDI DVQKNCVESI SHSSMTISRA ALGALKPLDN TLTEEASNLF YNLWKENPVV LDSWFAYEAS RPHKRGINVI EKLLSHPKFD WKAPNAIRAV LGGFSKNIDL FHSLDGQGYL FMADKLIEVD KINPITASRM VKVFSKWKTY INKNKEGMYE SLLKLNKANI SSNTREVVEL ILN
|
| |