| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0660 |
|---|
| Symbol | |
|---|
| ID | 3606037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1150796 |
|---|
| End bp | 1153363 |
|---|
| Gene Length | 2568 bp |
|---|
| Protein Length | 855 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637687522 |
|---|
| Product | Clp protease ATP-binding subunit |
|---|
| Protein accession | YP_291854 |
|---|
| Protein GI | 72382499 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.562676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGA GGTTTACAGA AAAGGCAATA AAAGTGATCA TGCTTGCCCA AGAAGAGGCA
AGACGCCTTG GGCATAATTT CGTGGGAACA GAGCAAATCC TACTTGGGCT AATTGGTGAA
GGTACTGGTG TTGCAGCTAA AGTTCTTAAA TCAATGGGTG TTAACTTAAA AGATTCAAGA
GTAGAAGTTG AAAAGATAAT AGGAAGAGGT TCAGGATTCG TTGCCGTAGA AATTCCCTTC
ACACCAAGAG CAAAAAGAGT ACTTGAACTT TCATTAGAAG AAGCTCGTCA ACTAGGTCAC
AATTACATTG GTACCGAACA TCTATTACTT GGTCTCATAA GAGAAGGTGA AGGAGTAGCA
GCAAGAGTTC TAGAAAATTT AGGCGTTGAT CTAACAAAAG TCAGGACGCA AGTTGTCAGA
ATGCTTGGTG AAACAGCAGA AGTTACAACA GGATCAGGTT CATCCAAAGG ATCAGCGAAA
ACTGCAACAC TTGACGAATT TGGAACAAAC CTAACTCAGC TAGCTAGTGA ATCAAAGCTT
GACCCAGTAG TGGGAAGACA TTCAGAGATT GATCGTGTAA TTCAAATACT TGGAAGAAGA
ACAAAAAACA ATCCTGTTTT AATAGGAGAG CCAGGGGTAG GGAAAACAGC TATTGCTGAG
GGACTTGCTC AGAGAATTCA GCAAGGAAAT ATTCCTGACA TACTTGAGGA GAAGAGAGTA
TTGACCCTTG ATATTGGTTT ACTTGTTGCG GGTACTAAAT ATAGAGGTGA ATTTGAAGAA
AGATTAAAAA AAATAATGGA AGAAATCAAA TCGGCTGGGA ATGTAATCCT AGTTATTGAT
GAAGTTCATA CATTGATAGG CGCAGGTGCT GCTGAGGGAG CAATTGACGC TGCAAACATT
TTAAAACCTG CCCTAGCAAG AGGAGAACTT CAATGTATTG GAGCTACAAC TCTTGATGAA
TATCGCAAAC ATATTGAAAG AGATGCTGCA TTAGAGCGAA GATTCCAACC CGTAATGATT
GGAGAACCTT CAATTAAAGA TACGATCGAA ATACTTAAAG GATTAAGAGA GAGATATGAG
CAACATCACA GATTGAAGAT TACAGATGAA GCTCTAGATG CTGCTGCTAA TCTTGGTGAT
AGGTATATCT CTGATCGTTT TTTACCTGAT AAAGCTATAG ACCTTATAGA CGAAGCAGGA
AGCCGAGTAA GATTACTCAA CTCCAAATTG CCTCCTGAAG CAAAAGAGGT TGATAAAGAA
TTAAGAAAAA TACAAAAGAG TAAAGAAGAA GCAGTAAGAG ATCAAAATTT CACCCAAGCA
GGAGAGCTCA GAGAGAAAGA AGTTGAACTT AGAGATAAGA TAAGAAATCT TTTGCAAAAT
ATAAGACAAA AACCATCAAC AAATGAAAAT CCCAATTCTA ATAATGTTCC ACAGGAAAAT
AATGAATCTT CAGACCAACT TATTACTCAG TCTGACGACT TAAAAGTTTC TCAACCGGTA
GTTAACGAAG AAGACATTGC TCATATTGTT GCTTCATGGA CTGGCGTACC TGTTCAGAAA
TTAACTGAAA GTGAATCAGT CAAACTTCTA AACATGGAAG ATACATTGCA TCAGAGACTG
ATTGGTCAAG ACGAAGCTGT GAAAGCTGTT TCCAAAGCAA TTAGGAGAGC TAGAGTAGGC
CTAAAGAATC CAAACAGACC AATTGCTAGC TTTATTTTTT CTGGTCCAAC GGGAGTTGGA
AAAACTGAAT TAACTAAAGC TTTAGCGGCC TATTTCTTTG GTAGTGAAGA AGCAATGATA
CGTCTAGACA TGTCTGAATT CATGGAAAGA CACACTGTTA GTAAATTAAT AGGTTCTCCT
CCAGGCTACG TAGGTTTCAA TGAAGGTGGA CAACTAACAG AAGCTGTAAG AAGAAGGCCC
TATACAGTAG TTTTGTTCGA TGAAATAGAA AAAGCTCATC CAGATGTGTT CAATCTTCTC
CTTCAATTAC TTGAAGAAGG GAGATTAACA GACTCAAAAG GAAGAACTGT TGATTTCAAA
AATACTCTAG TAATAATGAC CTCTAATATT GGATCTAAAG TTATAGAGAA AGGCGGAGGC
GGATTGGGAT TTGAATTCTC TGGTGAAAAT TTAGAAGATA CTCAATATAA TCGAATTAAA
TCATTAGTAA ATGAAGAACT AAAACAATAT TTCCGCCCTG AATTTCTCAA TAGATTAGAT
GAAATAATTG TATTTAGACA GCTTTCCAGA GACGAAGTCA AAGACATCGC AGAAATAATG
TTGAAAGAAG TATTCTTGAG AATAAAAGAT AAAGGAATAT CATTAACTGT TTCAGAGGAT
TTCAAAGAAA GATTAGTTGA AGAAGGATAC AATCCTTCTT ATGGTGCAAG GCCTTTAAGA
AGAGCTGTCA TGAGGTTATT GGAAGATAGC CTTGCCGAAG AAGTTTTATC AGGAAGGATA
AAAGACGGAG ACAAAGCGGA GGTAGATATT GATGAAAGTA AAAAAGTAAT TGTTAAACAT
CTTGGGAAAG ATGGTTCCAA ACCAGAATTA GCAAGCGCCA CTGTTTAA
|
|---|
| Protein sequence | MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGVAAKVLK SMGVNLKDSR
VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLL GLIREGEGVA
ARVLENLGVD LTKVRTQVVR MLGETAEVTT GSGSSKGSAK TATLDEFGTN LTQLASESKL
DPVVGRHSEI DRVIQILGRR TKNNPVLIGE PGVGKTAIAE GLAQRIQQGN IPDILEEKRV
LTLDIGLLVA GTKYRGEFEE RLKKIMEEIK SAGNVILVID EVHTLIGAGA AEGAIDAANI
LKPALARGEL QCIGATTLDE YRKHIERDAA LERRFQPVMI GEPSIKDTIE ILKGLRERYE
QHHRLKITDE ALDAAANLGD RYISDRFLPD KAIDLIDEAG SRVRLLNSKL PPEAKEVDKE
LRKIQKSKEE AVRDQNFTQA GELREKEVEL RDKIRNLLQN IRQKPSTNEN PNSNNVPQEN
NESSDQLITQ SDDLKVSQPV VNEEDIAHIV ASWTGVPVQK LTESESVKLL NMEDTLHQRL
IGQDEAVKAV SKAIRRARVG LKNPNRPIAS FIFSGPTGVG KTELTKALAA YFFGSEEAMI
RLDMSEFMER HTVSKLIGSP PGYVGFNEGG QLTEAVRRRP YTVVLFDEIE KAHPDVFNLL
LQLLEEGRLT DSKGRTVDFK NTLVIMTSNI GSKVIEKGGG GLGFEFSGEN LEDTQYNRIK
SLVNEELKQY FRPEFLNRLD EIIVFRQLSR DEVKDIAEIM LKEVFLRIKD KGISLTVSED
FKERLVEEGY NPSYGARPLR RAVMRLLEDS LAEEVLSGRI KDGDKAEVDI DESKKVIVKH
LGKDGSKPEL ASATV
|
|---|
| |