Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0613 |
Symbol | |
ID | 3605988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1101838 |
End bp | 1102737 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637687473 |
Product | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine |
Protein accession | YP_291807 |
Protein GI | 72382452 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4597] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0857916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA ATCAAAAATT ATTTTTGCAA TTTGGAATAT CTATTATCTT TTTTGGTTTA TTTGGGATAC TGATTAATAA TTTAACAATA AATCTAATAA GAACAGGTCT TGGTTTTAAT TTTAGCTGGC TTTTTAAACC AGCAAGTTTT GCTTTAGCGG AACACCCCTT ACCTTATACC TCTTCAGATA GCTATGCTTG GGCTTTATTT ATAGGTTGGC TTAACAGTCT TAAAGTTATT GTCTCATCAT TAATATTGGC TACTTTCTTG GGGACACTGA TAGGCTTTGC AAGGACAGGT ACGAATTCAT TACTAGGTCT CATTTCGGCT GGTTACATCA CAATAATTAG ACAAACCCCT CTTTTACTTC AACTTATGTT TTGGTATTTT GTTGGGTTCT TAGGTTTAAA AGACAATATG TTTATCCAAA TAAAAAATAT ATTTAATATT TCAAATAAAG GAATAGAGTT TTCAGGATTA ACTTTTTCTT CGGAGTTTCT AGCATTATTA TTTGGTCTAA GTATCTTTAC AAGTGCTTAC ATAGCAGAGG TGATCCGCGG AGGTATTCTT TCTGTTTCGA GAGGGCAATG GGAAGCGTTT AGGAGCTTAG GAATTTCAGA AAGAAAAGGA CTTATCCGCA TAATACTTCC ACAGGCATTA CCAGCGATCA TTCCTGGACT AACAAGTCAA TACCTTAACC TTGCTAAAAA TAGTACCTTA GCTATAGCCG TTGGATATTC AGATATTTAC GCAATTAATG ATACTATCAT TAATCAAACA GGTAGAGCTA TCGAGTGTTT TATTATATTA CTTTTTAGCT TCTTGCTATT AAATTTATTG ATAACTAATG CCATGGAAAT CATAAATAGA TTAATTTTAA AATCACAAAG ATACAGTTGA
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Protein sequence | MKKNQKLFLQ FGISIIFFGL FGILINNLTI NLIRTGLGFN FSWLFKPASF ALAEHPLPYT SSDSYAWALF IGWLNSLKVI VSSLILATFL GTLIGFARTG TNSLLGLISA GYITIIRQTP LLLQLMFWYF VGFLGLKDNM FIQIKNIFNI SNKGIEFSGL TFSSEFLALL FGLSIFTSAY IAEVIRGGIL SVSRGQWEAF RSLGISERKG LIRIILPQAL PAIIPGLTSQ YLNLAKNSTL AIAVGYSDIY AINDTIINQT GRAIECFIIL LFSFLLLNLL ITNAMEIINR LILKSQRYS
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