Gene PMN2A_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0613 
Symbol 
ID3605988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1101838 
End bp1102737 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content32% 
IMG OID637687473 
Productamino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine 
Protein accessionYP_291807 
Protein GI72382452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4597] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0857916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATCAAAAATT ATTTTTGCAA TTTGGAATAT CTATTATCTT TTTTGGTTTA 
TTTGGGATAC TGATTAATAA TTTAACAATA AATCTAATAA GAACAGGTCT TGGTTTTAAT
TTTAGCTGGC TTTTTAAACC AGCAAGTTTT GCTTTAGCGG AACACCCCTT ACCTTATACC
TCTTCAGATA GCTATGCTTG GGCTTTATTT ATAGGTTGGC TTAACAGTCT TAAAGTTATT
GTCTCATCAT TAATATTGGC TACTTTCTTG GGGACACTGA TAGGCTTTGC AAGGACAGGT
ACGAATTCAT TACTAGGTCT CATTTCGGCT GGTTACATCA CAATAATTAG ACAAACCCCT
CTTTTACTTC AACTTATGTT TTGGTATTTT GTTGGGTTCT TAGGTTTAAA AGACAATATG
TTTATCCAAA TAAAAAATAT ATTTAATATT TCAAATAAAG GAATAGAGTT TTCAGGATTA
ACTTTTTCTT CGGAGTTTCT AGCATTATTA TTTGGTCTAA GTATCTTTAC AAGTGCTTAC
ATAGCAGAGG TGATCCGCGG AGGTATTCTT TCTGTTTCGA GAGGGCAATG GGAAGCGTTT
AGGAGCTTAG GAATTTCAGA AAGAAAAGGA CTTATCCGCA TAATACTTCC ACAGGCATTA
CCAGCGATCA TTCCTGGACT AACAAGTCAA TACCTTAACC TTGCTAAAAA TAGTACCTTA
GCTATAGCCG TTGGATATTC AGATATTTAC GCAATTAATG ATACTATCAT TAATCAAACA
GGTAGAGCTA TCGAGTGTTT TATTATATTA CTTTTTAGCT TCTTGCTATT AAATTTATTG
ATAACTAATG CCATGGAAAT CATAAATAGA TTAATTTTAA AATCACAAAG ATACAGTTGA
 
Protein sequence
MKKNQKLFLQ FGISIIFFGL FGILINNLTI NLIRTGLGFN FSWLFKPASF ALAEHPLPYT 
SSDSYAWALF IGWLNSLKVI VSSLILATFL GTLIGFARTG TNSLLGLISA GYITIIRQTP
LLLQLMFWYF VGFLGLKDNM FIQIKNIFNI SNKGIEFSGL TFSSEFLALL FGLSIFTSAY
IAEVIRGGIL SVSRGQWEAF RSLGISERKG LIRIILPQAL PAIIPGLTSQ YLNLAKNSTL
AIAVGYSDIY AINDTIINQT GRAIECFIIL LFSFLLLNLL ITNAMEIINR LILKSQRYS