Gene PMN2A_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0503 
SymbolpurT 
ID3605877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1019950 
End bp1021113 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content35% 
IMG OID637687362 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_291697 
Protein GI72382342 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.333912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT TTCCAAAGAA AATAATGCTT TTAGGTAGTG GAGAATTGGG GAAAGAGGTA 
GCAATAGCAG CAAAGAGATT AGGTTGTTAT GTTATTGCAT GTGATAGGTA CAATGATGCT 
CCAGCAATGC AAATAGCTGA TCAATTTAAT GTATTTAATA TGAATAACGG TAGTGAATTA 
AAAGAAGTGA TATATAAATG TAATCCTGAT ATTATTATTC CTGAAATTGA GGCTCTTGCA 
GTTGATGTAC TAAAGGAAAT CGAACAAAAG ATAACAGTAA TACCCAACTC AAGAGCTACT 
GCAATAACAA TGAATAGAGA TAAAATTAGA GATTTGGCTT CTAACGAATT AAATATAAGA 
ACTGCAAAAT TTAGTTATGC GGTTAATCAA TCTGAGCTTG ATTTGCATGC AGAGACGATT 
GGGTATCCTT TATTAATTAA GCCAGTCATG AGTTCTTCGG GTAAAGGGCA AAGCTTAGTT 
AAAAATAAGA ATGATTTAGC ACAGGCTTGG AATTTGGCTA TTGAAAAATC AAGAGGTAAA 
TCAAATAAAA TCATATTAGA AGAATTTATT GATTTTGATT TGGAAATTAC TTTATTAACT 
ATTAGACAAT CTAATGGTAA GACATTATTT TGTGCTCCTA TAGGACATGA GCAAAAAAAT 
GGAGATTATC AATGTAGTTG GCAACCAGCT GAATTAACTG AAAGTGTCTT AGAGAAGGCT 
CAACAGATTG CCAAACGTGT TACCGATAAT CTTGGTGGAG TAGGTTTGTT TGGAGTTGAA 
TTTTTTATTA AGGGTGAGGA GGTGATTTTT TCAGAGCTAT CACCAAGACC GCATGACACA 
GGCTTAGTAA CTTTGATTAG CCAAAATTTA AATGAGTTTG AATTACACCT TAGAGCTGTT 
TTAGGTATCC CAATCCCAGA AATAGTTTGC CATGAAGCTT CTGCAAGTAG AGTGATTTTG 
GCTTCCATGG AAACCACAGA CGTTGCTTTT ACGGGACTTG AGCAAGCCTT AAGCCAATCG 
AATACAAATG TATTCATGTT TGGCAAGCCG AGCTCAACGG AAGGTCGTCG AATGGGAGTA 
GCCGTAGCAA AGGCTGAAAC AATCGACGAG GCAAGAATTA AAGCCGACAA TGCAGCGCAA 
TCAGTCCAAT TCATAAATGA ATAA
 
Protein sequence
MNVFPKKIML LGSGELGKEV AIAAKRLGCY VIACDRYNDA PAMQIADQFN VFNMNNGSEL 
KEVIYKCNPD IIIPEIEALA VDVLKEIEQK ITVIPNSRAT AITMNRDKIR DLASNELNIR 
TAKFSYAVNQ SELDLHAETI GYPLLIKPVM SSSGKGQSLV KNKNDLAQAW NLAIEKSRGK 
SNKIILEEFI DFDLEITLLT IRQSNGKTLF CAPIGHEQKN GDYQCSWQPA ELTESVLEKA 
QQIAKRVTDN LGGVGLFGVE FFIKGEEVIF SELSPRPHDT GLVTLISQNL NEFELHLRAV 
LGIPIPEIVC HEASASRVIL ASMETTDVAF TGLEQALSQS NTNVFMFGKP SSTEGRRMGV 
AVAKAETIDE ARIKADNAAQ SVQFINE