| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0485 |
|---|
| Symbol | |
|---|
| ID | 3605859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1005593 |
|---|
| End bp | 1006180 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637687344 |
|---|
| Product | rhomboid family membrane serine protease |
|---|
| Protein accession | YP_291679 |
|---|
| Protein GI | 72382324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGA AAATTTCAAA AGATGATTGG CAATATCTTG TCCCCTTTTT TGCTTGCACT
ATTTGCTTCA TTGCAACAGA TTTTTTAGGA ATAATTGATA AGACTTACAT TGCTTATTGG
TCTGGTCGTT TGTTTTATGA GCCATACAGG ATGATTACGT CCCATTTTTT TCACGGTGAC
CTAAATCATT TATTGGCAAA TGTCTCTGGA ATTATTGTGG CCAGATATTT TCTAAAATCA
CTTGGCCTTA AAAGTGACTA TTTCTTTCTA GCTTTTGTTG CATTGATAAT GCCTATCCAA
GCATTTATTT GTTGGTGCCT AGATATTTTA GTTTTAGGTA ATCCTATGTC TCTAGCAATT
GGCTTTAGTG GTGTTTTATT TGGTATCGAC GCTTTTATTT TAATGACAAC TATTTATGGA
AAGAATAAAT TTCTTTCAAT CAGTTGCGAA TTAAAGAAAG ATCCAGGATT ACTAAAATCT
ATTTCTTTAC TCACAGGTGT TGGAATTATT TGGTCATTCC TCCCTGGAAT TAGTCTATTT
GGTCATATGT CTGGACTTTT GGCAGGATTT CTATTGTTTT GGCTCTGA
|
|---|
| Protein sequence | MIEKISKDDW QYLVPFFACT ICFIATDFLG IIDKTYIAYW SGRLFYEPYR MITSHFFHGD
LNHLLANVSG IIVARYFLKS LGLKSDYFFL AFVALIMPIQ AFICWCLDIL VLGNPMSLAI
GFSGVLFGID AFILMTTIYG KNKFLSISCE LKKDPGLLKS ISLLTGVGII WSFLPGISLF
GHMSGLLAGF LLFWL
|
|---|
| |