Gene PMN2A_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0445 
Symbol 
ID3605819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp979990 
End bp981015 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content38% 
IMG OID637687305 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_291640 
Protein GI72382285 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.870437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTG GTATTAATGG TTTTGGTCGT ATAGGACGAC TTGTTCTTAG AGCACTCTGG 
GATAGGGAAA ATATCGAGAT TTCGCATATC AACGATCCAT TTGGTGATGC AAAGGGAGCT 
GCGCATTTAC TTGAATATGA CTCAGTTCAT GGTCGTTGGA ACAAAGCAAT AAGCAACGAC 
CAAAACAACC TGAGTATTGA AGGTCAGCCA ATATCTTTTT CTCAAGAAAG TGATTACACA 
AAAGTGCCAT GGAATGAAAA AGGCACAGAG CTAATTCTCG AATGCTCAGG AAAATTCAAA 
ACTCCTCAAA CATTAAATCC TTATTTTGAT ACTCTTGGGA TGAAAAGAGT TGTCGTTGCA 
TGTCCAGTAA AAGGATCCAT CCAGGGAGAG GATACTCTAA ATATCGTCTA CGGTATTAAT 
CATGATTTAT ATGAGCCCAA TAAACATCGC TTAGTAACAG CTGCATCCTG CACAACTAAT 
TGCTTAGCTC CCGTTGTGAA AGTTGTTAAT CAAGCTTTTG GTATAAAGCA TGGAAGCATC 
ACAACACTTC ATGATTTAAC AAATACACAG GTAATCGTTG ATTCTTTTAA ATCAGATTTA 
AGAAGAGCAA GGAGCGGATC ACAAAGCTTA ATTCCAACAA CAACAGGATC AGCAAAAGCG 
ATAGGGATGA TATTCCCAGA ATTACAAGGA AAATTAAATG GCCATGCAGT TCGAGTTCCT 
CTCCTCAATG GATCTTTAAC TGATGCTGTA TTTGAATTAG AGAAAGAGGT CACGCAAGAA 
GAAGTTAATC ATGTGTTCAA AGAAGCTTCA GAAGGAGAGC TAAAAGGAAT ACTTGGTTAC 
GAAGAAAAAC CACTTGTCTC AATTGATTAT GTCAATGACT CAAGGAGCTC AATCATAGAT 
GCGCCATCAA CCATGGTGAT CAATAAAACT CAATTGAAAG TCTATATTTG GTATGACAAT 
GAATGGGGTT ATAGCTGTCG AATGGCAGAT CTCGTTTGCC ATGTCATAAA TCTTGAAAAG 
GATTAA
 
Protein sequence
MRIGINGFGR IGRLVLRALW DRENIEISHI NDPFGDAKGA AHLLEYDSVH GRWNKAISND 
QNNLSIEGQP ISFSQESDYT KVPWNEKGTE LILECSGKFK TPQTLNPYFD TLGMKRVVVA 
CPVKGSIQGE DTLNIVYGIN HDLYEPNKHR LVTAASCTTN CLAPVVKVVN QAFGIKHGSI 
TTLHDLTNTQ VIVDSFKSDL RRARSGSQSL IPTTTGSAKA IGMIFPELQG KLNGHAVRVP 
LLNGSLTDAV FELEKEVTQE EVNHVFKEAS EGELKGILGY EEKPLVSIDY VNDSRSSIID 
APSTMVINKT QLKVYIWYDN EWGYSCRMAD LVCHVINLEK D