Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0424 |
Symbol | |
ID | 3605798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 959226 |
End bp | 959912 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637687284 |
Product | NAD-dependent DNA ligase N-terminus |
Protein accession | YP_291619 |
Protein GI | 72382264 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.609704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAG AGATTGAGGT ATCAAATCAC CTTGTAAGGA ATCTTGAGAG AATATCTCCA GACAATTCTA TCTTTAATTA CAAATCTGGA AGAAATGCCT TCTTATCATT AGGACAAGGA AATATTCGTG AATGGTTGGA GATATTTCTT CCGAATACAA GAATAATTTT AGAACCAAAA ATCATTGGAT CAATCATTGG CATTCAATAT ATCAATGGAG AATTAAACAA GGTCATAAAT AAAAATAGTC AAGACATTAC AGAAAGTGTA AGGTCTCTTA AAACTATTCC TAAAAGCCTA GCGATTAAAA ACAGACTTGA AATACAAGGA GTTCTTTACG ACTATAAAAA TTTATCAACT AGAAAAAATG AAACTGAATT TATAGATATT CAAAATTTTA TATCAAAGTC TAAAAGACTT AAATTCTGCG CTTTTCAAAT ATGTCAATGC AATATTAATC ATTTTCAATC ACTTCAGGAA TTAAAACATC TAAATTTTGA AATTCCTCAA ACTCAATTTA CAAACTTCAT TTCTGATATC GAAATCTATA TTCAATGTTG GAGAGAGGGT AAGTTATTTA CAAGCTATCC AACAAATGGA CTAGTATTGA AAATCAATTC AAGAAAATTG CAAAAGTATC TTGGAGAAAA TAACCTATCA ATACCTTGGG CATACGCCAT AAATTAA
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Protein sequence | MREEIEVSNH LVRNLERISP DNSIFNYKSG RNAFLSLGQG NIREWLEIFL PNTRIILEPK IIGSIIGIQY INGELNKVIN KNSQDITESV RSLKTIPKSL AIKNRLEIQG VLYDYKNLST RKNETEFIDI QNFISKSKRL KFCAFQICQC NINHFQSLQE LKHLNFEIPQ TQFTNFISDI EIYIQCWREG KLFTSYPTNG LVLKINSRKL QKYLGENNLS IPWAYAIN
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