Gene PMN2A_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0424 
Symbol 
ID3605798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp959226 
End bp959912 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content29% 
IMG OID637687284 
ProductNAD-dependent DNA ligase N-terminus 
Protein accessionYP_291619 
Protein GI72382264 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.609704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAG AGATTGAGGT ATCAAATCAC CTTGTAAGGA ATCTTGAGAG AATATCTCCA 
GACAATTCTA TCTTTAATTA CAAATCTGGA AGAAATGCCT TCTTATCATT AGGACAAGGA
AATATTCGTG AATGGTTGGA GATATTTCTT CCGAATACAA GAATAATTTT AGAACCAAAA
ATCATTGGAT CAATCATTGG CATTCAATAT ATCAATGGAG AATTAAACAA GGTCATAAAT
AAAAATAGTC AAGACATTAC AGAAAGTGTA AGGTCTCTTA AAACTATTCC TAAAAGCCTA
GCGATTAAAA ACAGACTTGA AATACAAGGA GTTCTTTACG ACTATAAAAA TTTATCAACT
AGAAAAAATG AAACTGAATT TATAGATATT CAAAATTTTA TATCAAAGTC TAAAAGACTT
AAATTCTGCG CTTTTCAAAT ATGTCAATGC AATATTAATC ATTTTCAATC ACTTCAGGAA
TTAAAACATC TAAATTTTGA AATTCCTCAA ACTCAATTTA CAAACTTCAT TTCTGATATC
GAAATCTATA TTCAATGTTG GAGAGAGGGT AAGTTATTTA CAAGCTATCC AACAAATGGA
CTAGTATTGA AAATCAATTC AAGAAAATTG CAAAAGTATC TTGGAGAAAA TAACCTATCA
ATACCTTGGG CATACGCCAT AAATTAA
 
Protein sequence
MREEIEVSNH LVRNLERISP DNSIFNYKSG RNAFLSLGQG NIREWLEIFL PNTRIILEPK 
IIGSIIGIQY INGELNKVIN KNSQDITESV RSLKTIPKSL AIKNRLEIQG VLYDYKNLST
RKNETEFIDI QNFISKSKRL KFCAFQICQC NINHFQSLQE LKHLNFEIPQ TQFTNFISDI
EIYIQCWREG KLFTSYPTNG LVLKINSRKL QKYLGENNLS IPWAYAIN