Gene PMN2A_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0393 
Symbol 
ID3605767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp939059 
End bp940276 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content37% 
IMG OID637687253 
Productdelta(12)-fatty acid dehydrogenase 
Protein accessionYP_291588 
Protein GI72382233 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0147446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA GTTTGTTTAC TAGATTCGAG AGGGTCAATA CCGAAACTAA TAATAGGACT 
TTTCTTCCTT CTGGTCTTAA TGGGAAAGCA TTAGATATTT CACTGGATGA TATTCCCTCT
AGAAAAGAAG TTAGAGATGC GATACCTAAG CATTGTTTTA CTCGCCAAAC TAATAGATCT
CTTTTTTATC TCTCCAGGAC AGTAGTTATT CAGATCTTTG TTGTTTTGAT AGGTCTTTCT
ATCCCTCTTA CCAAGGGGAT GATTCCAATT TGGATTTTAT ATGCAATTCT CTCTGGGACA
ACTTCAATGG GGCTATGGGT TTTAGCTCAT GAATGTGGAC ATGGTGCATT TTCTGATAAT
CGTAAACTTG AAACAGTTGT CGGATATTGT CTGCATTCTT TTTTATTAGT TCCATACTTT
TCGTGGCAAA GATCGCATGC TGTTCACCAT GCTTTTACCA ATCACATAAC GGATGGAGAG
ACCCATGTTC CTGTTGTGAT CTCAGGGGAT GGTAAATCCG AAAAAAAAGG TGGAGAGAAT
GAAATGGAGT CTTCGTTGTT TTTTGGCAAA ATTCTATATG GATTTAATCA ACTGTTTCTT
CACTTGATTC TGGGATGGCC AGCTTACTTA CTACTTGGCA AAACAGGCGG ACCTCGATAT
GGGACCAGTA ATCATTTCTG GCCAACAGCT CCCTTCTCGA AAAAACTTTG GCCATCCATA
TGGGCTAAAA AGGTATGGAT CTCCGACTGG GGAATTGGTT TTATGCTCCT TTTATTGATC
CTTTGGTCTA TAAATTTTGG ACTTAATTCT ATGATTAGTC TTTATTTAGG TCCTCTTATT
GTTGTTAATA TTTGGCTAGT TATTTATACA TGGCTCCACC ATACAGATAC TGATGTTCCA
CATCTTGGTG CTAGTCAATT CTCCTATATG AGAGGAGCCT TCTTATCTAT AGATAGACCC
TATGGCAGGA TATTTGATTT TCTTCATCAC TCTATAGGTT CTACTCACGC CATTCATCAT
ATTGAACCAA CAGTTCCTCA CTATCATGCA AGACTTGCAA CGAGAATATT GAAAAATAAA
TTTCCTAAAG TATACCTATA TAATCCCACC CCAATTCACA AGTCTCTTTG GCACATAGCC
ACTAATTGTG TTGCAGTAAA AAAGGATTAT GCTATAGATA GATATGTTTG GAAACAACCC
TACCATTCAC AGTCTTAA
 
Protein sequence
MKKSLFTRFE RVNTETNNRT FLPSGLNGKA LDISLDDIPS RKEVRDAIPK HCFTRQTNRS 
LFYLSRTVVI QIFVVLIGLS IPLTKGMIPI WILYAILSGT TSMGLWVLAH ECGHGAFSDN
RKLETVVGYC LHSFLLVPYF SWQRSHAVHH AFTNHITDGE THVPVVISGD GKSEKKGGEN
EMESSLFFGK ILYGFNQLFL HLILGWPAYL LLGKTGGPRY GTSNHFWPTA PFSKKLWPSI
WAKKVWISDW GIGFMLLLLI LWSINFGLNS MISLYLGPLI VVNIWLVIYT WLHHTDTDVP
HLGASQFSYM RGAFLSIDRP YGRIFDFLHH SIGSTHAIHH IEPTVPHYHA RLATRILKNK
FPKVYLYNPT PIHKSLWHIA TNCVAVKKDY AIDRYVWKQP YHSQS