| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0369 |
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| Symbol | |
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| ID | 3605743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 915117 |
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| End bp | 918620 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637687229 |
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| Product | transcriptional-repair coupling factor |
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| Protein accession | YP_291564 |
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| Protein GI | 72382209 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTTAG AGTCAATAGC AAAATATTTA GAAAACCATC ATTTAACAAC TGAGTTGATT
GAACGAACAA ATAGAGAAGA AAGATTAATA TTAACAGGAG CATCGCGGAC AGCAAAGGCA
TTAATAACAA CTTCGCTTGC TAAAAATGAG TCCAAAAGAT TATTAGTAAT TGTCCCAACA
TTAGAAGATG CAACTAGATG GTATCCCCTT GTAAAAGATT GCGGTTGGAC TAAGACATGT
TTATATCCAA CAAGTGAAGT CTCACCATAT GAAACTACGC AGGTTACTTC AGAAATCATT
TGGGGTCAAT TACAAGTACT AAGCGATATA TTGGAATTAA AAGATGATGA GAATATCGCA
ATAATTGCAA CAGAAAGATC TTTACAACCA CATCTGCCCC CATTTGAACA CCTTAGAGAA
AAGTGTATTA AATTAAACGT AGGTGATGAA ATAAATCTAA GTGATTTATC TTTAAAATTG
AGTGAAAGTG GATATATCAA GTCTAATAAT ATAGATCAAG AAGGAACATG GACAAGACGT
GGAGATATTA TTGATATTTA CCCTGTTAGT AGTGAACTTC CAATTAGATT AGAGCTATTT
GGTGATCTAT TAGATAAGAT TAAAGAATTT GATCCAATTT CACAAAGGTC ATTAGATCAA
ATCAACAATG TATGCATAAC ACCCACGGGT TTTGATCCAC TAATCATTAA TAAGCTTATA
TCAACTGACA ACAAGGATAT ATCGAGTTTA TTTACTAATG ATGAGTTCTC TGAGTTAGTA
GATTCAAATA AATTGGATTC AGCAAAGAAA TATTTAGGAG TTGCATTTGA CAAGCCTTCA
TCATTATTAG ATTACTTAGA TGATAAGACA TTTATTGTGG TTGATGAGAG GTTTCAAGGT
ATATCTCATG GGAAAGCTTG GTATAATATT GTTAATGATA ATTATACAGA TGTAATTACT
ACTATAAAAG GTAGTGAAGC AACAAAAACT ATATTTAAAC CTAATCTTCA TAAAGACATT
AATGATATAT ATGATTCTCT AAATAATTAT AAAGGTATTG ATATAACAGA TTTAGAAGAC
ACTACAAAGA AAACGAATGT TTTTAGTATT TCAAGCAAAG TTCATAATTG GCTGCCTAAT
CAATACGGTA AAATAAGTTT ATCTTTAAAA GATTACATCA AGAATAAATA TTCTATTTGG
ATAATTTCAG CACAACCTAG TCGTGCAGTT TCTTTGTTAG AAGAACATGA ATGTATCTCA
AAGTTTATAC CTAATAATAC CGATCTTAAT GGTATCAAAA ATATTATCGA TGACAATATT
CCAGTAGCTA TTAAAAATAA AAATGAGGGT GAAATTGAAG GATTTTATCT TCCTGCATGG
AAAATTGCAC TATTAACGGA TAAGGAGTTT TTCGGACAAC AAAATATTTC TACGACTGGT
TATATAAGAA GAAGAAAACA ATCTCAAAGT AAAAAGATAG ATCCTAATAA GATGAAACCA
GGCGATTATG TTGTTCATAG AAATCATGGA ATTGGTTTAT TTCAGAAAAT TGAAAAATTA
AATATTAATG GAGAGTCAAG AGATTATTTG GTAATAAAAT ATATGGATGG AAAGCTAAGT
GTTGCTGCAG ATCAACTTGG AAGTCTAGGT AGGTATAGAA GTTCAAATGC AAAGACTCCT
ACAATTAGTA AATTAGGAGG AGCTAATTGG AACAAAATAA AGGAAAAGGC AAAGAAATCC
GTTAAAAAAG TTGCTATTGA TTTAATTAAG TTATATGCAG AAAGAAGTAA AGAAAAAGGG
TATAAATTCC CATGTGATGG GCCCTGGCAA AACGAATTAG AAGACTCATT TCCATACGCA
CTTACACCTG ATCAAGCAAC AGCTACATCT CAAGTTAAAT CTGATATGGA AAGTGAAAAG
CCTATGGATA GATTAGTTTG CGGCGATGTT GGATTTGGGA AAACAGAAGT TGCTATACGA
GCAATATTTA AGGCTATTAC CTCAGGAAAA CAAATAGCTT TATTAGCACC AACGACTGTA
TTATCTCAAC AACATTGGAG AACTATTTCT GATCGATTTG CTCCTTATCC TATAAAAGTT
TCATTACTCA ATAGATTTAA AACAAATAGT GAAAAAAAAC ATATAGTTAG TGGCCTGAAA
GATGGACAAA TTGATGCAGT TGTTGGTACA CATCAGCTCT TGAACAAAAA ATTAGTTTAT
AAGGACTTGG GACTTCTAGT TATAGATGAA GAACAACGTT TTGGAGTTAA TCAAAAAGAG
AAAATAAAGG AATTAAAAAA AAGTGTAGAT GTATTAACCC TTTCAGCGAC TCCAATTCCA
AGAACACTCT ATATGAGTCT TTCTGGTGTC CGTGAAATGA GTTTAATAAC AACACCGCCT
CCCCTACGAA GGCCAATTAA AACACACTTA GCACCCCTCG ATAATGAAAT AATAAGAAGT
GCAATTTCAC AAGAGATTGA TAGAGGTGGA CAAATATTTT ATATTGTTCC TCGAATAAAA
GGAATAGAAG ATGTAGCAGA GAAATTAAAA ATTATGATCC CAAATGTGAA ATTATTGATT
GCACATGGTC AAATGGAGGA GGGAGCATTA GAGAATGCAA TGCTTGCATT TAATGCAGGA
GAAGCCGATA TTTTGCTTTG TACAACTATT GTAGAAAGTG GATTAGATAT TCCTAGAGTA
AATACTATTT TAATTGAAGA TTCTCACAAG TTTGGTTTAT CTCAACTTTA CCAATTGAGA
GGCAGAGTAG GCCGAAGTGG AGTACAAGCA CATGCTTGGT TATTTTATCC AAGCGATGAG
AAATTAAATG AGACATCAAG GCAACGTTTA AAGGCTATAA AAGAATTTAG TGATTTGGGC
AGTGGTTATC AGTTAGCCAT GAGGGACATG GAAATTAGAG GCGTTGGAAA TATCTTAGGT
ATTGAACAAA GCGGACAAAT GGAAACAATA GGATTTGATT TGTATATGGA ATTATTACAG
GAAACTATTG CCGAAATACA GGGGCAAGAC ATTCCTAGTG TTGACGATAC TCAAATAGAT
CTACCTGTGA CAGCTTTTAT ACCAGGAGAT TGGATAACTG ATCCAGATGA AAAAATAAAT
GCATATAGAT TAGCCACACA ATGCGAAAAC AATGATTCAT TAGTTCAATT TGCTAGCAAC
TTGGTTGATA GATATGGAAC ATTACCAAAA GCAGTTGAAT CATTAATAGA AGTAATGAAA
TTAAAAATAA TCGCTAAAAA GTGTGGCTTC TCAAGAATCA AGTTATCCAA ACCAAATGTT
GAGCTTGAGA CAATGATGGA TGAGCCAGCA TTCAAGTTAC TAAGAAAAGG TTTGGCTAAT
CACCTTCATG GAAGATTTAT TTATAAGAAA GGGGATAAGT GTTCAACGGT GACTATTCGA
GGGCTCGGAA TCTTGGATAG CGATAAACTT CTAGATCAAT TAACTGAATG GCTAAAACTT
ATGAATTCAG AAATAAACGC TTAA
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| Protein sequence | MSLESIAKYL ENHHLTTELI ERTNREERLI LTGASRTAKA LITTSLAKNE SKRLLVIVPT
LEDATRWYPL VKDCGWTKTC LYPTSEVSPY ETTQVTSEII WGQLQVLSDI LELKDDENIA
IIATERSLQP HLPPFEHLRE KCIKLNVGDE INLSDLSLKL SESGYIKSNN IDQEGTWTRR
GDIIDIYPVS SELPIRLELF GDLLDKIKEF DPISQRSLDQ INNVCITPTG FDPLIINKLI
STDNKDISSL FTNDEFSELV DSNKLDSAKK YLGVAFDKPS SLLDYLDDKT FIVVDERFQG
ISHGKAWYNI VNDNYTDVIT TIKGSEATKT IFKPNLHKDI NDIYDSLNNY KGIDITDLED
TTKKTNVFSI SSKVHNWLPN QYGKISLSLK DYIKNKYSIW IISAQPSRAV SLLEEHECIS
KFIPNNTDLN GIKNIIDDNI PVAIKNKNEG EIEGFYLPAW KIALLTDKEF FGQQNISTTG
YIRRRKQSQS KKIDPNKMKP GDYVVHRNHG IGLFQKIEKL NINGESRDYL VIKYMDGKLS
VAADQLGSLG RYRSSNAKTP TISKLGGANW NKIKEKAKKS VKKVAIDLIK LYAERSKEKG
YKFPCDGPWQ NELEDSFPYA LTPDQATATS QVKSDMESEK PMDRLVCGDV GFGKTEVAIR
AIFKAITSGK QIALLAPTTV LSQQHWRTIS DRFAPYPIKV SLLNRFKTNS EKKHIVSGLK
DGQIDAVVGT HQLLNKKLVY KDLGLLVIDE EQRFGVNQKE KIKELKKSVD VLTLSATPIP
RTLYMSLSGV REMSLITTPP PLRRPIKTHL APLDNEIIRS AISQEIDRGG QIFYIVPRIK
GIEDVAEKLK IMIPNVKLLI AHGQMEEGAL ENAMLAFNAG EADILLCTTI VESGLDIPRV
NTILIEDSHK FGLSQLYQLR GRVGRSGVQA HAWLFYPSDE KLNETSRQRL KAIKEFSDLG
SGYQLAMRDM EIRGVGNILG IEQSGQMETI GFDLYMELLQ ETIAEIQGQD IPSVDDTQID
LPVTAFIPGD WITDPDEKIN AYRLATQCEN NDSLVQFASN LVDRYGTLPK AVESLIEVMK
LKIIAKKCGF SRIKLSKPNV ELETMMDEPA FKLLRKGLAN HLHGRFIYKK GDKCSTVTIR
GLGILDSDKL LDQLTEWLKL MNSEINA
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