Gene PMN2A_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0366 
Symbol 
ID3605740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp912545 
End bp913555 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content32% 
IMG OID637687226 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_291561 
Protein GI72382206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTG TTTTTTGGGG AACGCCTAAA TATGCCGCAG AAAATTTAAA AACCATCGCT 
AAGGCCGGCT ACGAAGTTAT AGCTGTAGTT ACTCAACCAG ACAGAAAGCG TGGAAGGGGC
AAAAAATTGT CACCTTCTCC AGTAAAAGAA GCAGCTGAAG AACTATCCAT ACCTGTCTAT
GCAACAAATT CAATAAGTAA AGATCAAAAA ACAAAAGAGA TACTCCTGAA TTTGAAGGCT
GATGTTTATC TAGTTGTTGC TTTTGGTCAA ATTCTTCCAA AAGAAATATT AGATCAGCCA
AAACTTGGAT GCTGGAATAG CCACGCTTCT CTGCTTCCTG TTTGGAGAGG AGCTGCACCA
ATTCAGTGGA GCATAATTAA TGCTGATGCC AAGACAGGTA TTTGTATTAT GTCAATGGAA
GAAGGCTTAG ATACAGGACC AGTTATTGAA CAAGAGTCAA CAGTTATAAA AGATTCAGAT
AATCTTGAGA TACTTACGAA TAGACTATCG GTAATGTCAT CAAAACTTTT ACTTAAGTCA
CTTGAAAAAA TAAAGCTAAC CAAAGGATTA AACAAATCAT CAAGACTTAA ACAATTGAAT
GCAATTGAGC AGAGAAATTT AAATGGTATT CCAAGTTATG CAAGACAAAT AACAAAAGAA
GACAATTTAA TAGATTGGAA TCAAGATGCA AGAAAGATAT TAAAAAAAAT TCAAGGATTA
TACCCCAATG CTTATACATT GTATAATGGT AAAAGAATAA AGATTTTAGA TGCAATTATA
TCTTGCGATA ATAATCAATC TAAAGAAAGT CAAGATATAA AAAATCAATC AAAATCAAAT
AGAATACCTG GAGAAATATT TATGATAAAT AAACAAATTG GTATAAAAAT AATGACAAAT
GATTTTCCTG TTCTAATTAA ATATGCACAG TTAGAAGGCA AAAAAGCAAC AGACAGTTAT
ACGTTATCAA TCCAGTCAAA TCTTAGCATC AATGATAAAC TTGGAATCTA A
 
Protein sequence
MKIVFWGTPK YAAENLKTIA KAGYEVIAVV TQPDRKRGRG KKLSPSPVKE AAEELSIPVY 
ATNSISKDQK TKEILLNLKA DVYLVVAFGQ ILPKEILDQP KLGCWNSHAS LLPVWRGAAP
IQWSIINADA KTGICIMSME EGLDTGPVIE QESTVIKDSD NLEILTNRLS VMSSKLLLKS
LEKIKLTKGL NKSSRLKQLN AIEQRNLNGI PSYARQITKE DNLIDWNQDA RKILKKIQGL
YPNAYTLYNG KRIKILDAII SCDNNQSKES QDIKNQSKSN RIPGEIFMIN KQIGIKIMTN
DFPVLIKYAQ LEGKKATDSY TLSIQSNLSI NDKLGI