Gene PMN2A_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0357 
Symbol 
ID3605731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp902515 
End bp904383 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content31% 
IMG OID637687217 
Productexonuclease RecJ 
Protein accessionYP_291552 
Protein GI72382197 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.5723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT GGATATTACC TAAGCCAATA AATGAAGCTG AGATAACTAA TATAAATTTA 
AATCACACTC TTCAAGCCGT CTTAATTAGG AGAGGGATCG ATCTAAATAA TGAATTTGAT
GAATATATAA CACCATCAGA CCTTCCAAAT CCCGAAGAAC ATTTCGATGA ATTATCTAAA
GCGACTCAAA GAATAATTAA GGCTTGCTTA CAAAAAGAAA ATATTGCAAT ATGTGGTGAT
TATGACGCGG ATGGTATAAC AAGTACAGTG CTTTTAGTTG AATTATTGTC AATACTTGGA
GCAATAGTTA AGCCGTTTAT ACCTTCAAGA CAGGATGAGG GTTATGGCCT TAATGAAAAC
ATGATAAATA ATATAAATAA TCAAGGAATT AAGCTTGTAA TTACAGTTGA TAATGGCATA
TCTGCATTTG CCGCAATCAA GAAATCTGTT GATCTTGGGA TTGATTTAAT TATCACAGAC
CACCATAAAA TACCTGATAA GAAATTAAAT ATTTTTTCGC TTATACATCC AGAAAAAACT
CCTATTAATT CACCTTATAA ATATTTGGCA GGTGTAGGTA TTGCATACCT ACTAGCAAAG
AATATATGTG AGAAGATTGA TTATGATATA AACATTTCTA CGGCTAATAT ATTCTTTTGT
ATTGGCACTA TTGCGGACAT GGCTCCCCTT AAAGGTGCCA ATAGAAAATG GCTTAAAGAG
TGTTTACCAA AAATAAATTC AACAACTAAC AAAGGGATTA AATCTATTAT GAAGAAGCTA
TCAATTCATA ATGTTGATAT AACATCAGAT GATATTGGGT TTAAGATAGC TCCTTTAATA
AATGCTGTCG GTAGAATTGG TGACCCCAAC CTTATCATTG ATCTCTTTAC AAATAAATCA
AATGATTCAG TTGTTAAACT CACAAATGAT TGTTTTAATA TGAATCGGGA AAGAAAAAGA
TTAACGTCCT TAGTTGAACA AGAAGCTTTA GAAATAGCAG TAAGTGAATA TAGATGTGAT
AGAAAATTTC TAGTATTAAC TAAGAGAGAA TGGCACCCTG GAATAATAGG AATAGTTGCG
GCTAGAATAG CTGAAAAGTT TAATTTACCA ACTGCTTTAC TTGCACAAGC AAATGATGGG
AACTTCAGAG GATCTATAAG ATCAAACAAT AAATTAATGG TAAACCAGGC CTTAGCTGAA
TGCGATGATC TTTTAATAGC GCATGGAGGC CACTCAGCCG CTGCAGGGTT TTCAATTAAA
AGCGAAAATA TTGACAAGCT TAGAGAAAAG CTAAATCAAA TAGCTAATCG AGAATTTAAA
GATATTAATT TATATAAGTC AATAACTCCT GATGCATTTA TTAGTTTTGA TCAAATTAAT
TATAATTTTT ATAGAGAATT AACTTTAATA GGTCCATTTG GAATAATGAA TCCTACACCG
ATTTTCTGGG CAAGAAAGTG CAAAATCCTA GATATCTATA AACTAAAGGG TGATCACCTA
AAAATGACTC TTAATGACGG AACTTCGACA ATAGAGGCAA TTAAATGGAA TGGATCTATT
GAATTAAAAA AACAAGATTT AATTGATATC GCTTTCTATA TTGAAATAAA TAGATGGAAA
AAATTAAATA CACTTCAATT AAATATTTTA GATATTAAAC ATCATAAAGA TATAGTTAGT
TTACAATTGC ACAATCGTAT GTATAAATGC CAATTAATGG ACACTAAAAA TATATTAATC
ACTAACTCAA AAGGCCAGTC TTTTAGTTCA GACTTATCAA TATCATCTGA GAATTTAAAT
GTAGATCAGA AAGTATTTGC AAAAAAAATT CTTACTTTCG CAAAGATTGC ACTAGGCAAG
GCTGCTTAG
 
Protein sequence
MNRWILPKPI NEAEITNINL NHTLQAVLIR RGIDLNNEFD EYITPSDLPN PEEHFDELSK 
ATQRIIKACL QKENIAICGD YDADGITSTV LLVELLSILG AIVKPFIPSR QDEGYGLNEN
MINNINNQGI KLVITVDNGI SAFAAIKKSV DLGIDLIITD HHKIPDKKLN IFSLIHPEKT
PINSPYKYLA GVGIAYLLAK NICEKIDYDI NISTANIFFC IGTIADMAPL KGANRKWLKE
CLPKINSTTN KGIKSIMKKL SIHNVDITSD DIGFKIAPLI NAVGRIGDPN LIIDLFTNKS
NDSVVKLTND CFNMNRERKR LTSLVEQEAL EIAVSEYRCD RKFLVLTKRE WHPGIIGIVA
ARIAEKFNLP TALLAQANDG NFRGSIRSNN KLMVNQALAE CDDLLIAHGG HSAAAGFSIK
SENIDKLREK LNQIANREFK DINLYKSITP DAFISFDQIN YNFYRELTLI GPFGIMNPTP
IFWARKCKIL DIYKLKGDHL KMTLNDGTST IEAIKWNGSI ELKKQDLIDI AFYIEINRWK
KLNTLQLNIL DIKHHKDIVS LQLHNRMYKC QLMDTKNILI TNSKGQSFSS DLSISSENLN
VDQKVFAKKI LTFAKIALGK AA