Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0353 |
Symbol | |
ID | 3605727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 899278 |
End bp | 901005 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637687213 |
Product | peptidase M41, FtsH |
Protein accession | YP_291548 |
Protein GI | 72382193 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.209104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA GTTATAGTCA ATTATTGAGG GATATTGAAA GTGGTGAAAT TATTTCAATT ATTTTAATTC CAAATAGAAG AGAGGTCATT GTTGAATTAA TAAATGGAGA GAAAAAATTA ATACCTATAT TTTATAATGA TCAGAAAATT CTTCGAATAT CTGAGGAATA TAATGTTCCT CTTACTGTAA GAGATATTAG ATCAGACCAG AGATTAGCAA ACTACATAAC AGGTTTTGGC CTCACTTTGA TTTTTGTTTT CTCTCTTGTA TTTTTAATTA GAAGATCATC CAAGTTATTA AACAATCTGC AAAGTTTTTC TGGTCGTTCT TCTCAAGTAA ATGAAGATGA TATTAGAAAA TACACATTCG ATGATGTGGC TGGATTAAAT CAAGAATCAG ACGAATTAAA GGAAATAGTA ATCTTTTTAA AGAATCCACA GACATTAAAA GACCTCGGAG CTAAAACGCC GAAGGGAGTT TTATTAGTGG GTCCACCTGG AACCGGTAAG ACATTACTAG CTCGCTCAAT TGCAGGAGAA GCTGATGTTC CTTTCTTTTC TATTTCTGCA TCGGAATTTG TTGAAATGTT CGTAGGTGTT GGAGCTGGAC GTGTCCGTGA TTTATTTAAA AGTGCTAAAT CAAAGGCTCC TTGCATAGTC TTCATAGATG AAATTGACTC TATTGGACGA CAAAGGGGAG CTGGAATAGG AGGAGGCAAC GATGAGAGAG AGCAAACACT TAACCAGCTC TTAACCGAGA TGGATGGATT CGAAGCAAAT AATGGAGTCA TAGTTATTGC AGCTACGAAT AGACCCGATA TTCTTGACCG AGCATTAACT AGGCCTGGTA GATTTGACCG TCGTATTGAC ATATCCCTTC CTGATCGAGA AGCTAGACAC AAAATTTTGT CCGTTCACGC AAGGACAAAA CCTTTATGTG ATTCAGTGAA TCTGAAAGAC TGGGCAACTA AGACGCCTGG CTACTCAGGT GCAGATTTAC AAAACCTAAT GAATGAGGCT GCAATCTATG CTGCTAGAAA TAATAAGTCA GTCATAAGCA GTGTTGAACT AGAAAATGCA CTTGAAAAAA CACGATTTGG AATACTGTCT AAGCCACTTT CAGATCAGAC AAAAAAAAGA CAAATTGCTT ATCAGATTAT TGGTAAAACC CTTGTTGCTT TATTGATTCC GACCCAAGAT AAATTAGAAA AAATCTCTTT ATTTAAGTCT CTCGGAAATA TTTCTGGAAT GACTTATTTC ACACCAGATG AAGAGACCAT TGACAGCGGA CTTTTTACAC GTAACTACAT TTATAACAAA ATTGTTATTT CACTTGGTTC TAGGGCTGCT GAAATGATTA TTTTTGGCTC TAAGGAAGTT ACACAAGGAT CACAAAAGGA ACTAGAAAAT GTATATTTTT GGGCAAATCA AATGGTTACT AAATTTGGAT TCTCAGATCT TGGACCTATT ACTTATGATT CAGAAAAAGA TACAATTTTT CTTGGAAAGG ATCTTATGAA GAATAAAAAA GAATATTCTC AGAGGACAAG CAGGGAAATT GATAAGCAAA TTATTTCAAT AGCAAATAAG GCTGTTAATC ATGCAATATT TCTTCTTTCA GATAAAGTTT CCTTAATGGA TAATCTTGTT GATGAATTAA TAGTTAAGGA AACTCTTGAA TCTGATTTTG TAATTGATTC ACTTAATTCT TACTTATCTA GCAACTAA
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Protein sequence | MSKSYSQLLR DIESGEIISI ILIPNRREVI VELINGEKKL IPIFYNDQKI LRISEEYNVP LTVRDIRSDQ RLANYITGFG LTLIFVFSLV FLIRRSSKLL NNLQSFSGRS SQVNEDDIRK YTFDDVAGLN QESDELKEIV IFLKNPQTLK DLGAKTPKGV LLVGPPGTGK TLLARSIAGE ADVPFFSISA SEFVEMFVGV GAGRVRDLFK SAKSKAPCIV FIDEIDSIGR QRGAGIGGGN DEREQTLNQL LTEMDGFEAN NGVIVIAATN RPDILDRALT RPGRFDRRID ISLPDREARH KILSVHARTK PLCDSVNLKD WATKTPGYSG ADLQNLMNEA AIYAARNNKS VISSVELENA LEKTRFGILS KPLSDQTKKR QIAYQIIGKT LVALLIPTQD KLEKISLFKS LGNISGMTYF TPDEETIDSG LFTRNYIYNK IVISLGSRAA EMIIFGSKEV TQGSQKELEN VYFWANQMVT KFGFSDLGPI TYDSEKDTIF LGKDLMKNKK EYSQRTSREI DKQIISIANK AVNHAIFLLS DKVSLMDNLV DELIVKETLE SDFVIDSLNS YLSSN
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