Gene PMN2A_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0338 
SymbolpheT 
ID3605711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp883231 
End bp885705 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content33% 
IMG OID637687197 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_291533 
Protein GI72382178 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0255237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAT CTGTTTCTTG GCTAAAAGAT CTTGTCGAAT TTAACAATGA TATTGACGAG 
CTTTCTGAAA AGCTGTCAAT GACAGGCTTT GAGGTTGAAT CTTTAGAAGA CTTATCAGAA
CAAGCAAAGA ATGTTGTTAT TGGTTTTGTT GAGGAAATCA CGCCGCATCC AAATGCTGAA
AAGCTAAAAG TTTGTTCTGT AGATGTTGGT TTACCCAAAA AGTTGAGCAT TGTTTGTGGT
GCACCAAATG TAAAAGCAGG ATTTCACGTC CTAGTGGCGA AGGTTGGAGC TTATTTATCT
TCAAAGTCAC TAAAAATAAA ATTATCTAAT TTACGTGGCG TTGAAAGCGA GGGAATGATT
TGCTCGCTGG AAGAATTAGG TATTGAAAGT AGTAATGAAG GTATTGAAAT TCTTGAAGAA
AATGAAGCAA ATATCCCACC AATTGGTTCA AATGCTGTTG ATTACCTTTG TTTGAATGAC
ACCATAATTG AATTAGCTAT TACTGCTAAT AGACCTGATG GTATGTCAAT GGTAGGTATT
GCACGAGAAA TATCTACAAT AACAAATTCA AAATTAACAT TACCAAATTT AAATTACATT
GAAGACTTTA ATATATTTGA ACCAAAAATA TGTGATAAAG AAACGATTGG AGTAGACTGT
ATATACTCAA TTACGTATAT AGACAGTATT GACAATACTG GAAAGACAAA TAAAAATATT
TTTAATAAAT TAAGTTCATT AAAACAAAAT TGTATAAATC CTGTTGTAGA CATAACAAAT
TATTTAATGC TTGAACAGGG ACAACCATTA CATGCTTTTG ATGCAGATCT ATTAGATAAT
ATAATTGGTA GAAAGGTTAA ACCAAATGAT TTTGGTATTA GAAATGGTAA GCAAGGTGAA
TTATTTGTCG CACTTGATAA AAAGGAATAT AAGATAAATC CCACGATAAA GTTGATTACC
TGCGACGATA TTCCAATAGC AATAGCAGGA GTTATAGGTG GAAATAATAG TTCTGTAAGT
GATAAAACAA CAAGGATTTG GTTAGAAGCT GCTGTATTTA CCCCTACTTC AATTAGAAAT
AGCAGTAGAG AAATAGGTCT TAGGACAGAT GCAAGTAGTA GGTACGAAAA AGGAATATCG
TCAAATATGA CTACTGCTGT TTCTAAAAGA GCTAGTGAAC TAATTTCTGT TCAGTTAGGA
GGAGACAATA TATCTTCTTA TGTTAATACT GATTTCAAGA AAAAAAGTAT TAGTGTTAAT
CTAAGAATGG ATAAAATCAA TAGCGTCTTA GGTAAATTAA GTAGCTCTGA TAGTAATTTT
GTAAATAATA ATTCTACTAA ACTTCGATAT CTTAATGAAG ATGAGATTGA GACACTCTTA
TCAAAACTTG GTCTCATACT TACTTCAAAT GATTCCGGTT GGAATGTTCA AGTACCTCCT
TATAGATCAT CTGATTTAAC AAGAGAAATT GATTTAATAG AGGAGATAGC GAGGCTAATT
GGATATGACA ATTTTGATTC AAATATGCCA GATCCTCTTG AGCCAGGAGT ACTTTCACCC
ACTAAGTTAG TTGAAAGACG TTTACGAAAT TCTTTCATCC ACAATGGTTT TCAAGAGGTA
GTTACTTCTT CACTTGTTGG TCCAGAAAAT ACTGATGATA ATGCTGTATT GATTAAAAAC
CCATTACTAT CAGAGACAAG TAGATTAAGA ACAAATGTAT GGGATGAACA TCTTAAAATA
CTTCAGAGAA ACGTATCTTT TGGAGCTGAA GGTTGTTGGA TCTTTGAAAT AGCAAAGACA
TACAAAAAAG ATAAAGAATG TTTTGTTGAA ACTAATTTGT TATCAGGTGC ATTGACTGGT
AGTAAACGAC TTAGTAAGTG GGGCGGAGCG TCAAAACAAC TATCGTTAGA TTATTTTGAA
GCAAGAGGCA AACTTAAGCA ATCTCTTGAT GTTCTTGGAG TTGAGACTAT TGATAAGCAG
CTTGCTGAAA AAGATTTTAT GCATCCAGGC CGAACTTCTG AATTATTTGT TGAAGGCAAA
AGTATCGGCT TCTTTGGTCA AATTCATCCT TCGCAGTCTG AGAAATTTGA TCTAATTAAG
GAAACTTATT TATTTAACCT TGATTTTGAT TCATTGATAA AAGCTGCGAC AAGGAAAACA
AATTGGACAA GAATTTACAA GGATTACCCC ACTGTTCCTT ATATGGAAAG AGATATTGCC
CTCATACATT CAAAAAAATA TAGCTCTTTA GAAATCATGG GTCTAATTAA AAAAACTGGA
AGGCCATTAT TAGAGAAAGT AGAGTTAATA GATCGTTACG AGGGCTCTTC AATGCCCGAG
GATGAGATTA GCCAAGCTTT TCGAATCAGA TACAGAGATG CAAAAAAAAC ATTAGTAGAG
AAAGACATTA ATCCAATACA CGAAAAGATT AGAAATGCTC TTAAAGAAAA AATAAAAGCG
GAACTAAGAA GTTAG
 
Protein sequence
MKVSVSWLKD LVEFNNDIDE LSEKLSMTGF EVESLEDLSE QAKNVVIGFV EEITPHPNAE 
KLKVCSVDVG LPKKLSIVCG APNVKAGFHV LVAKVGAYLS SKSLKIKLSN LRGVESEGMI
CSLEELGIES SNEGIEILEE NEANIPPIGS NAVDYLCLND TIIELAITAN RPDGMSMVGI
AREISTITNS KLTLPNLNYI EDFNIFEPKI CDKETIGVDC IYSITYIDSI DNTGKTNKNI
FNKLSSLKQN CINPVVDITN YLMLEQGQPL HAFDADLLDN IIGRKVKPND FGIRNGKQGE
LFVALDKKEY KINPTIKLIT CDDIPIAIAG VIGGNNSSVS DKTTRIWLEA AVFTPTSIRN
SSREIGLRTD ASSRYEKGIS SNMTTAVSKR ASELISVQLG GDNISSYVNT DFKKKSISVN
LRMDKINSVL GKLSSSDSNF VNNNSTKLRY LNEDEIETLL SKLGLILTSN DSGWNVQVPP
YRSSDLTREI DLIEEIARLI GYDNFDSNMP DPLEPGVLSP TKLVERRLRN SFIHNGFQEV
VTSSLVGPEN TDDNAVLIKN PLLSETSRLR TNVWDEHLKI LQRNVSFGAE GCWIFEIAKT
YKKDKECFVE TNLLSGALTG SKRLSKWGGA SKQLSLDYFE ARGKLKQSLD VLGVETIDKQ
LAEKDFMHPG RTSELFVEGK SIGFFGQIHP SQSEKFDLIK ETYLFNLDFD SLIKAATRKT
NWTRIYKDYP TVPYMERDIA LIHSKKYSSL EIMGLIKKTG RPLLEKVELI DRYEGSSMPE
DEISQAFRIR YRDAKKTLVE KDINPIHEKI RNALKEKIKA ELRS