| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0333 |
|---|
| Symbol | |
|---|
| ID | 3605706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 875932 |
|---|
| End bp | 879480 |
|---|
| Gene Length | 3549 bp |
|---|
| Protein Length | 1182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637687192 |
|---|
| Product | putative methionine synthase |
|---|
| Protein accession | YP_291528 |
|---|
| Protein GI | 72382173 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACT TTTTAGACTA TCTAAACTCA GAGAAAAGGC CAATAATAGT CTTTGATGGT
GCAACAGGCA CGTCTTTACA AGATCAACAA CTAACTGCAG ATGATTATGG TGGTGCTTCT
TTAGAAGGTT GTAATGAAAA TCTTGTTTTA ACCTCTGTCT CTAGTGTTGA GAAAGTACAT
CAGTCATTCT TAGAGGCCGG TTGTGATGTA ATAGAAACAA ATACATTTGG CGCAACTTCT
ATTGTTCTTG ATGAGTATGG AATTGGAAAC AAAGCTTATG AGATCAATTT CAAAGCTGCA
CAAATAGCAA GGAGTATTGC AAATAAATAT CAAACAGCTG AAAAGCCAAG ATTTGTTGCT
GGTTCAATTG GTCCAACAAC AAAGCTTCCA ACCCTTGGTC ATATCAGTTT TGATGAATTA
AAAAAATCTT ATCTTGAACA AGCTAAAGCA CTGATTGAGG GTGGAATTGA TCTTTTTCTT
ATTGAAACTT GCCAAGATGT TTTACAAATA AAGGCAGCTC TGCAGAGCGT AAATGAAGCA
ATAGGTGATG GAATTAAAAT CCCAGTAATG GTATCTGTAA CCATGGAAAC TACAGGTCAG
ATGCTTATTG GTAGCGATAT TTCTTCCATA ACAACAATTT TAGAGCCTTT TAATATTGAT
ATTTTGGGCC TTAATTGTGC TACTGGCCCA GAAGAAATGA AAGATCATAT TAAATACTTA
TCTGAGCATT CACCCTTTCA CATAAGTTGT ATTCCAAATG CTGGACTTCC TGAAAATGTA
GGAGGTAAGG CTCATTATCG ATTAACCCCA ATGGAACTTA AGTTCCAACT TAGTCATTTT
ATTAATGATT TAGGCGTTCA ATTAATTGGT GGTTGTTGTG GGACGAGGCC AGAACATATA
AAACAACTTT CAGATTTATC GCTTGAGCTT TTATCATCAG ATCGTAGGTT GATTAACCTA
TCAAAGGAAA GATCTATAAT TCCAGCTGCA TCTTCAATTT ATGAGTCAAT TCCATATGAA
CAAGACAACT CATTTTTGAT AGTTGGCGAA AGATTAAATG CAAGTGGTTC AAAAAAGGTA
AGAGAACTTT TGAATATTGA GGACTGGGAT GGTCTGGTTG GAATAGCAAA ATCACAACTT
AAGGAAAATG CGCATGTACT TGATGTAAAT GTTGATTTTG TTGGAAGAAA TGGCATAGAA
GATATGTCGA ACTTGGTTAA AAGATTAGTT AATAATATCA ATTTACCTTT GATGCTTGAT
TCAACGGATT ATGAAAAAAT GGAGAGTGGT TTAAAACATG CTGGCGGAAA ATGTATTTTA
AATTCCACTA ACTACGAAGA TGGACAAGAT AGATTTCATA AAGTGATTGA TCTAGCTAAA
GAACATGGTT CAGCAGTTGT AATTGGAACA ATTGATGAAG ATGGAATGGC TAGATCTGCA
GAAAAAAAAG CCGAAATAGC AACTAGGGCT TTTAAGGATG CTACAAATTC TGGGTTGAAA
CCCTATGAAA TTTTTTATGA TCCTTTAGCT TTGCCAATAT CTACAGGACT TGAGGAAGAT
AGAAAGAATG GTTTTGAAAC GATTAAAGCT ATTAAGTTAA TTAAAGATCG ACATCCACAA
GTACATTTAA TCCTAGGCAT TTCAAATGTA AGTTTTGGCC TATCATCTAG TGCGAGAGTT
GTCCTTAATT CTATCTTTCT AAATGAAGCA ATTAAGGCTG GATTAGATTC GGCAATTGTT
TCACCATCCA AGATATTACC TTTAAATAAA ATTAGTGAAG AAGAGATAAA AATATGTTTA
GATCTTATTT ATGACAAGAG AATTATAGAT AATAGTGTAT GCACTTATGA CCCCCTAACG
ACCCTAACTT CTTATTTTGA TGACTCGAAA AAACTTCTAA ATAATAGCTC AATTGATGAG
GATATTAATT TACCTATTGA AGATAAGTTG AAGAATCATA TTATTGATGG AGAAAAAACA
AATCTACATT CAAATCTTGA TTTAGCATTA AATAAATATA AGCCTTTGGT AATAATTAAT
GAATATTTAC TAGATGGAAT GAAAGTTGTT GGGGAATTAT TTGGATCAGG TCAAATGCAA
TTACCTTTTG TACTTCAATC TGCAGAAACA ATGAAATATG CAGTTTCATA TTTAGAAGAT
TTTATGGATA AATCCGAGGT AAATCAATCA AAGGGTAAAT TTATTATAGC TACTGTCAAA
GGCGATGTTC ACGATATAGG AAAAAATTTA GTAGATATTA TTTTGTCGAA TAATGGGTAT
GATGTTATTA ATTTAGGAAT TAAACAAGAT GTCAATGCAA TTATAAACGC ACAAAAAGAA
CACCATGCCG ATTGCATTGC AATGAGCGGT CTACTTGTAA AATCGACTGC CTTTATGAAA
GATAATCTTA AAGCTTTAAA TGAGGAAGAT ATTGATGTAC CTATTATTTT AGGTGGGGCT
GCATTAACCC CTAAATTTGT TAACCAAGAT TGCGCAAGTG TGTACAAGGG CAAGGTTATT
TATGGGAGAG ATGCCTTCAC TGATTTGAAA TTTATGGACG CATATATGAA AGCTAAATTA
GCTAATAACT GGAATAACAA AACAGGTTTT TCCGAAGGAG CTCCTGAGGG GATTACTATT
GGAACTTATA AAAGTTCTAA TTCAGATCCA AAAGTAATAA AAGAGAGTTT AGAGGTTAAA
AAAGTTAACG ACAATTCCAG ATCAAAAGAT ATATCTTCAG TAAAATCTAT TAAACCTCCA
TTTTTAGGCC CCAAGGTTTT ACTTGAAAAA GATATTGATT TATCCAATGT TTATAAATTC
TTAGACCGTA ATGCATTATT TGCTGGACAA TGGCAAATGA AAAGATCCAA GGACATGTCG
GCTTCAGATT ATAAGGAATT TCTTAAGAAA AAGGCTGAGC CAAAATTAGA TTATTGGATG
AATAAAATCA TAAATGATAA TCTTATCTCA CCATCATTGG TATATGGATA TTTTCCATGT
GGGAGAGAAG GGAATTACTT AAATGTTTAT GACACTGATC ACAAATCTCT TTTAGGAAAA
TTTCTATTAC CCAGACAAAG ATCTGGAAAG AGATATTGTA TCGCAGATTT TTATAATGAC
TTAGTAGATA ATCATCCTTC TGATTATCTA CCTATGCAGG CAGTTACAAT GGGAGAAAAA
GCTAGTGACT ATTCCCATAA ATTATTTAGC AAAGACTCTT ATTCTGATTA TCTATTTTTC
CATGGTTTAA CTGTACAATT AGCTGAAGCC CTAGCAGAAT ATATACACTC AATTATTAGA
ATAGAGTGTG GTTTTAAATA TGAAGAACCA GATAATATTA AAGATATATT GGATGTAAAG
TATAGAGGTT GTAGATACTC ATTTGGTTAC CCTGCTTGCC CAGAGGTATC TGATTCTAGA
AAGCAATTAG ATTGGCTAGA TGCAGATAAA ATTAATATAT CTATGGATGA AAGTGAGCAA
CTGCATCCAG AACAAAGTAC TACTGCAATT GTTGCATTAC ATCCAGTAGC TAAATACTTT
GGTATTTAA
|
|---|
| Protein sequence | MTHFLDYLNS EKRPIIVFDG ATGTSLQDQQ LTADDYGGAS LEGCNENLVL TSVSSVEKVH
QSFLEAGCDV IETNTFGATS IVLDEYGIGN KAYEINFKAA QIARSIANKY QTAEKPRFVA
GSIGPTTKLP TLGHISFDEL KKSYLEQAKA LIEGGIDLFL IETCQDVLQI KAALQSVNEA
IGDGIKIPVM VSVTMETTGQ MLIGSDISSI TTILEPFNID ILGLNCATGP EEMKDHIKYL
SEHSPFHISC IPNAGLPENV GGKAHYRLTP MELKFQLSHF INDLGVQLIG GCCGTRPEHI
KQLSDLSLEL LSSDRRLINL SKERSIIPAA SSIYESIPYE QDNSFLIVGE RLNASGSKKV
RELLNIEDWD GLVGIAKSQL KENAHVLDVN VDFVGRNGIE DMSNLVKRLV NNINLPLMLD
STDYEKMESG LKHAGGKCIL NSTNYEDGQD RFHKVIDLAK EHGSAVVIGT IDEDGMARSA
EKKAEIATRA FKDATNSGLK PYEIFYDPLA LPISTGLEED RKNGFETIKA IKLIKDRHPQ
VHLILGISNV SFGLSSSARV VLNSIFLNEA IKAGLDSAIV SPSKILPLNK ISEEEIKICL
DLIYDKRIID NSVCTYDPLT TLTSYFDDSK KLLNNSSIDE DINLPIEDKL KNHIIDGEKT
NLHSNLDLAL NKYKPLVIIN EYLLDGMKVV GELFGSGQMQ LPFVLQSAET MKYAVSYLED
FMDKSEVNQS KGKFIIATVK GDVHDIGKNL VDIILSNNGY DVINLGIKQD VNAIINAQKE
HHADCIAMSG LLVKSTAFMK DNLKALNEED IDVPIILGGA ALTPKFVNQD CASVYKGKVI
YGRDAFTDLK FMDAYMKAKL ANNWNNKTGF SEGAPEGITI GTYKSSNSDP KVIKESLEVK
KVNDNSRSKD ISSVKSIKPP FLGPKVLLEK DIDLSNVYKF LDRNALFAGQ WQMKRSKDMS
ASDYKEFLKK KAEPKLDYWM NKIINDNLIS PSLVYGYFPC GREGNYLNVY DTDHKSLLGK
FLLPRQRSGK RYCIADFYND LVDNHPSDYL PMQAVTMGEK ASDYSHKLFS KDSYSDYLFF
HGLTVQLAEA LAEYIHSIIR IECGFKYEEP DNIKDILDVK YRGCRYSFGY PACPEVSDSR
KQLDWLDADK INISMDESEQ LHPEQSTTAI VALHPVAKYF GI
|
|---|
| |