Gene PMN2A_0293 details

Gene Information

• Locus tag: PMN2A_0293
• ID: 3605665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 831107
• End bp: 833029
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637687151
• Product: FtsH peptidase
• Protein accession: YP_291488
• Protein GI: 72382133
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAGA AATGGAAAGT TGTAGCACTT TGGGTGCTAC CCATAACGAT AGTAATACTA 
ATTACGTGGC AAATTCTTGG CTCTTCAACA AATACCCAAG TTAATCAAAC AAATACATCT 
AATCCATCAA GAAATGCTCC GGTTGCAAAG ATCAGTTATG GAAGATTTCT TGATTATGTA 
AAAGCTGGAA GAGTAACTTC TGTTGACATT TACGAAGGTG GTAGAAATGC AATCGTCGAG 
TCCGTTGATC CCGAAATTGA TAACAGAATT CAACGTTTAA GAGTTGATCT ACCAGGTTTG 
GCTCCTGAAT TAGTCTCCTC CCTAAAAGAT GAGGGAATCA GTTTTGACAT TCATCCACCT 
AAAACGGCAC CAGCGGGAGT TGGAATTCTT GGCAACCTTC TCTTTCCAAT TATTCTAATA 
GGAGGTCTGA TTTTACTTTC AAGAAGATCA AACTCTATGC CAGGCGGTCC AGGGCAAGCT 
ATGCAATTTG GTAAAACAAA AGCAAGATTT GCAATGGAAG CTGAGACTGG TGTCAAATTC 
GATGATGTAG CAGGAGTAAA TGAAGCGAAA CAGGATTTAG AAGAGGTTGT CACATTTTTA 
AAACAACCTG AAAGATTTAC ATCTGTAGGG GCTCAAATAC CAAGAGGTGT TTTACTAGTT 
GGTCCTCCAG GAACAGGTAA AACCCTATTA GCAAAGGCTA TTGCTGGAGA AGCTGGAGTT 
CCTTTCTTCT CTCTTTCAGG TTCAGAATTT GTAGAAATGT TTGTAGGTGT AGGTGCAAGT 
CGTGTCAGAG ATTTATTTAA AAGAGCCAAA GAAAACAGTC CTTGCTTGAT TTTTATTGAT 
GAAATTGATG CAGTCGGAAG ACAGAGGGGT GCTGGAATTG GAGGAGGTAA TGACGAAAGA 
GAGCAAACAC TCAATCAACT TCTGACTGAG ATGGATGGAT TTGAAGGTAA TAGTGGAATC 
ATCATCATTG CAGCTACAAA TAGACCTGAC GTTCTTGACT CAGCATTGAT GAGGCCAGGT 
AGATTCGATA GACAAGTAAC CGTTGACGCG CCAGACATAT CAGGGAGATT GTCAATTCTC 
AAAGTTCACT CAAGAAATAA AAAATTAGAA AAGGATTTAA CTTTAGAAAG TATTGCTAGA 
AGAACCCCTG GTTTTACAGG TGCTGATTTA GCCAATTTGC TAAATGAAGC AGCTATTCTT 
ACAGCCAGAA GAAGAAAGAA TCAAATAGGT CTTTCTGAAA TTGATGATGC TGTTGATCGC 
ATCATTGCAG GAATGGAAGG GACACCACTA GTAGATGGAA GAAGCAAGAG ACTCATCGCC 
TATCACGAGG TTGGTCATGC CTTGATAGGG TCATTGGTAA AAGATCATGA TCCTGTTCAA 
AAAGTAACTG TTATCCCAAG AGGACAAGCA CAGGGTTTGA CATGGTTCTC TCCAGATGAT 
GATCAGTCTT TGATTAGCAG GGCACAATTA AAAGCAAGAA TTATGGGGGC TCTTGGAGGG 
AGAGCTGCAG AGGATATTAT TTTCGGAAGA GAAGAAGTAA CAACTGGGGC TGGAGGTGAT 
GTACAAATGG TTGCATCAAT GGCAAGGCAA ATGGTTACGA GGTTTGGCAT GAGCAGCCTC 
GGTCCAGTTT CATTAGAAGG TGATAGCCAA GAAGTATTTG TAGGAAGAAG CTTAATGAAC 
ACATCTGATA TATCAGATGG AATTTCAAAG CAAATTGATG AACAAGTCAG ATCAATAGTT 
AAAAAGTGCT ACCAAGAAAC ACTTGAATTG GTTGAAAAGA ATAGATCAGC CATGGATAAA 
TTGGTTGAAA TTTTAATCGA AAAGGAAACT ATGGATGGAG ATGAATTCTG CAAAATATTA 
TCTCAATATA CGACTATTCC TGAGAAAGAT AGATTTATAC CTGTTCTACC GGATGCAAAA 
TAG 

 

Protein sequence

MDKKWKVVAL WVLPITIVIL ITWQILGSST NTQVNQTNTS NPSRNAPVAK ISYGRFLDYV 
KAGRVTSVDI YEGGRNAIVE SVDPEIDNRI QRLRVDLPGL APELVSSLKD EGISFDIHPP 
KTAPAGVGIL GNLLFPIILI GGLILLSRRS NSMPGGPGQA MQFGKTKARF AMEAETGVKF 
DDVAGVNEAK QDLEEVVTFL KQPERFTSVG AQIPRGVLLV GPPGTGKTLL AKAIAGEAGV 
PFFSLSGSEF VEMFVGVGAS RVRDLFKRAK ENSPCLIFID EIDAVGRQRG AGIGGGNDER 
EQTLNQLLTE MDGFEGNSGI IIIAATNRPD VLDSALMRPG RFDRQVTVDA PDISGRLSIL 
KVHSRNKKLE KDLTLESIAR RTPGFTGADL ANLLNEAAIL TARRRKNQIG LSEIDDAVDR 
IIAGMEGTPL VDGRSKRLIA YHEVGHALIG SLVKDHDPVQ KVTVIPRGQA QGLTWFSPDD 
DQSLISRAQL KARIMGALGG RAAEDIIFGR EEVTTGAGGD VQMVASMARQ MVTRFGMSSL 
GPVSLEGDSQ EVFVGRSLMN TSDISDGISK QIDEQVRSIV KKCYQETLEL VEKNRSAMDK 
LVEILIEKET MDGDEFCKIL SQYTTIPEKD RFIPVLPDAK