| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0283 |
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| Symbol | secF |
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| ID | 3605655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 824530 |
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| End bp | 825495 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637687141 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_291478 |
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| Protein GI | 72382123 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.164559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA AATTTAATGT TCAAATTTAT AAAAATAGAA AATATGTGTG GCTTATTTCA
TTCTCTTTAT GTTTAATTTC AATAATTGGA ATGCTAATTT GCCTTAAAAG TACTTCTATT
AATGCCCCTT TAAATCTTGG CTTAGACTAT ACCGGAGGAA CTCAAATAAC CTTAGAGAGG
AGTTGTACTG ATGAATGTAT TAGCTTAAAT ACAAGTGAAA TATCTAATAA TATAATCGCT
TTAAAAAAAC AGGACAAAAG CTTTAGTTCA AATACATCTC CCAACTTATC TAGATCACAG
ATTCAATTAC TTGATAATTC ACAATTAATA TCCATTAGGC TTCCATTTTT ATCGGCAAAT
CAATCTGAGT CTGTAGTGGC CGAGGTTAAT AAATCTTTTG GCCCATTTAA CAATGAAAAT
ACGTCTGTTG AAATTATTGG TCCAAGTCTT GGGAGGCAGT TACTTAAAAG TAGTTTAATT
TCTTTATTCT TTGCTTTTCT TGGAATAGCT TTATATATTA ATTTTAGATA TGATCGACGA
TACTCATTTT TAGCATTATT AGCTCTTTTG CATGACATAC TTATTGTTTG TGGTGTATTT
GCATGGCTGG GGTATTTCTT TAATGTAGAG GTCGATTCCT TATTTGCTGT ATCTCTTTTA
ACCATTGCAG GCTATTCAGT AAATAATACT GTTGTCGTTT TTGATAGGAT AAGAGAAAAA
AGTTTAATAG AAAATCAATT AAGTTATAAA TATCAGATTG ATAAAGCCGT TGGTGCAACA
TTGACGAGGA CGATATATAC AAGTCTTACA ACACTTCTTC CATTAATATG TATATTAATT
TGGGGAGGAT CAACATTGTA TTGGTTTGCA TTTGCGTTGT TAATCGGAGT TATAATTGGA
TCATGGTCGA GTATAGCTTT AGCTCCTTCA TTGTTATCAA TAACAAGTAC AAAGAAGCTT
GATTGA
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| Protein sequence | MKAKFNVQIY KNRKYVWLIS FSLCLISIIG MLICLKSTSI NAPLNLGLDY TGGTQITLER
SCTDECISLN TSEISNNIIA LKKQDKSFSS NTSPNLSRSQ IQLLDNSQLI SIRLPFLSAN
QSESVVAEVN KSFGPFNNEN TSVEIIGPSL GRQLLKSSLI SLFFAFLGIA LYINFRYDRR
YSFLALLALL HDILIVCGVF AWLGYFFNVE VDSLFAVSLL TIAGYSVNNT VVVFDRIREK
SLIENQLSYK YQIDKAVGAT LTRTIYTSLT TLLPLICILI WGGSTLYWFA FALLIGVIIG
SWSSIALAPS LLSITSTKKL D
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