Gene PMN2A_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0271 
SymboldnaG 
ID3605643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp814051 
End bp816078 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content35% 
IMG OID637687129 
ProductDNA primase 
Protein accessionYP_291466 
Protein GI72382111 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.59752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTG CTCGACTACA TCCTAAGACA ATTGAGTCTG TAAAAGAGCG CGTAGATATT 
GTTGATGTTG TTGGTGAACA CGTCGTTTTA AAGAAAAAAG GTAAAGAATA TGTTGGAATA
TGTCCTTTTC ATGATGATAG TAAACCTTCA ATGTCAGTAA TTCCTGGCAA GCAATTTTAT
TATTGTTTTT CATGTGGAGC TGGTGGAAAT GCAATTAAAT TCTTAATGGA GTTTCAGAGA
CAAAGTTTTA GTGATGTTGT TCTTGAGTTG GCTAAGAAAT ATCAAGTACC AATTGATACG
ATTGAAGGAC CTCAACAAGA AAGACTCAAG CAACAGCTTT CACGTAGAGA TACCCTTTAT
CGTGTTTTAA AAACCGCTAC TGGTTGGTTT AGAAATCAAT TGAATTCTCC ATGTGGAGAA
AATGCACTTA ATTACCTTAA GAATAAGCGT AATTTAAGTG ATGGAACTTT AATCAATTTT
GAACTTGGTT TTGCTCCAGA TAATTGGGAT TCACTGCTTA AATATTTTGT AGACATTGAA
AAAGTCAGTG TTGAAATCCT TGAATCGGCG GGATTGATTG TTCCTCGAAA GGGTGGTAAT
GGTTTCTATG ACAGATTTCG CAATCGAATA ATTGTTCCTA TTCACGACAG GCAAAAAAGA
GTTATTGGTT TCGGCGGACG AAGTCTTGAT GGTTCAGAAC CTAAGTATTT AAATTCACCT
GAGACTGAAA TCTTTGAAAA AGGAAAAAAT CTTTTTGGTT TTGATAAATC CACACTTTCC
ATTAGGAAAA AAGATTATGC AGTTGTTGTA GAGGGATATT TTGATGTGAT GGCACTTCAT
GATTCGGGTA TTACAAATGT TGTCGCTTCT TTAGGAACAG CATTAAGTCG CAATCAAATA
ACGCTTCTTT CTCGTGCCAC CGATAGTAAA AAGATCCTCT TAAATTTTGA CTCAGATAAT
GCTGGAATTC GTGCGGCTAA TAGAGCCATT AGTGAAGTAG AAAACCTTGC TATTCAAGGT
CAACTAGATT TACGAGTCCT TCAATTACCT TCAGGTAAAG ATCCAGATGA ATTTCTTAAG
GATAATTCTC CATCCGAATA TGAAGCATTA GCGGCAAAAT CACCTCTTTG GATGGATTGG
CAAATTGATC AATCATTGAA GGATTTAGAT TTAAGTAAAT CTGATCAATT TCAGGAAGCC
GTTAGCAGCT TAGTAAGTCT CCTTGGAAAG CTTCCTCAAA CTGCAATTAG AACTCATTAT
CTACAGAAGG TTGCTCAGCG TCTTAGTGGA GGTCAAGGTA GATTCTCTCT ACAACTAGAG
GAGGATTTAC GTAATCAAAT AAGTGGTCAA AGATGGCACG GTCGATCGAA AAAAATTGAT
AAGCCTCAAG AAATTAGTCT CAGAGAAAGA AGTGAGGCAG ATATACTTTT TACTTATATT
CACTGTCCTA ATTATAGATC TTTTATTCGT TATGAACTTC GATTAAGGGA TCTTGATGAT
TTCGCGATTA ATCATCATCG TGCAATATGG TCTACAATAA GTAACATTGA GGAAAATATG
TTTGGTCCTG AAATTGTTGA GAAGATTAAT CGTTTTAATG ATTCTAATAA TATTTTAGCT
GATGTTGATT TAATTAAAAA GTTGTTAGAT AATTTCCTAT CCAGTGATAA TGAGCATCTT
CCTAAACTTA CTCCTTTACT AGATGTTAAT GAACTTCGTT TGGCAACATT AAATGACCCC
GAGTCGCTCA TCCGTGGAGC TTTGGCTGCT CTTGAAAAGC AAAAATCCTT AAAACGTTGT
AGACATTTAA TTGATGCATG GAGTTCGCAG AGATTGCAAA CCCTTGAGAA TTGTATAGCC
TCTCTTATTG TTCAGGAAAA ATCTGAGCCT AGCGATTCAT CTGATATGGA ACAGAGAGTT
ATTAGCATGT TTGAAGACTT AAATAATGAT GCTATAAATT TTCAACAACT TTATTACGCG
GAAAGAAAAC ACATACTAAA TCTAGATCAA CAGAGATGTT ATAAATAA
 
Protein sequence
MASARLHPKT IESVKERVDI VDVVGEHVVL KKKGKEYVGI CPFHDDSKPS MSVIPGKQFY 
YCFSCGAGGN AIKFLMEFQR QSFSDVVLEL AKKYQVPIDT IEGPQQERLK QQLSRRDTLY
RVLKTATGWF RNQLNSPCGE NALNYLKNKR NLSDGTLINF ELGFAPDNWD SLLKYFVDIE
KVSVEILESA GLIVPRKGGN GFYDRFRNRI IVPIHDRQKR VIGFGGRSLD GSEPKYLNSP
ETEIFEKGKN LFGFDKSTLS IRKKDYAVVV EGYFDVMALH DSGITNVVAS LGTALSRNQI
TLLSRATDSK KILLNFDSDN AGIRAANRAI SEVENLAIQG QLDLRVLQLP SGKDPDEFLK
DNSPSEYEAL AAKSPLWMDW QIDQSLKDLD LSKSDQFQEA VSSLVSLLGK LPQTAIRTHY
LQKVAQRLSG GQGRFSLQLE EDLRNQISGQ RWHGRSKKID KPQEISLRER SEADILFTYI
HCPNYRSFIR YELRLRDLDD FAINHHRAIW STISNIEENM FGPEIVEKIN RFNDSNNILA
DVDLIKKLLD NFLSSDNEHL PKLTPLLDVN ELRLATLNDP ESLIRGALAA LEKQKSLKRC
RHLIDAWSSQ RLQTLENCIA SLIVQEKSEP SDSSDMEQRV ISMFEDLNND AINFQQLYYA
ERKHILNLDQ QRCYK