Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0262 |
Symbol | |
ID | 3605634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 804412 |
End bp | 805662 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637687120 |
Product | RNA methyltransferase TrmH, group 3 |
Protein accession | YP_291457 |
Protein GI | 72382102 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTATC GCTTCAATAA AGACACAAGG AATTCAAAAA ACTCTTCATC TAATAAACGA AGTAGTAATT ATTCTCGTCA AGATAATGAC TCCAAAAAGT CAAACTTTAA TGATAGAAGA AGAACCAATA ACAAAATAAA TCGTCATTCT TCTGATCAAG TAAATCAATA TTCATTAGGT AAAGAATTTT CTGATCGATC AAGAAGTAGT AACGAGGCTA ATTCCAACTA CAGAGGATCT AATCGATTCG AGAGGAAATC GACCAACTCT TCGTATAGAA ATCAAGACTC TCAGGAAACA AACAATTACA GAGGATCTAA TCGATTCGAG AGGAAATCGA CCAACCCTGC GTACAGAAAT AAAAATTCTC AGGGAGCTAG CAGTTATAAA AGAGAAGAAA ATAATGAACC TCTTTCATAT TCTGAAAGCT TTAGCAAAAC ATTAAGTGAT GATCTGATTT GGGGCCGCCA TTCAACTGAG GCAGCCCTTG TTGGCGGCAG GGCAATTCAC AGGATTTGGT GTACCTCCGA ATTACGCAGT ACACCAAAGT TTTTTCAACT TCTCAAAGAT CAAAAAGCTT CTGGGGTCTT AGTTGAAGAA GTTTCATGGT CAAGGCTTGG CCAGCTCACA AATGGTGCAG TCCATCAAGG AATAGTTTTA CAAATTGCCG CATCAAAAAC ACTTGACTTG AAGAATTTAA TAGATGCTTG CAAAGCTTTT GGTGATTCAT CATTGCTCTT AGCTTTAGAT GGCTTAACTG ATCCTCAGAA TCTTGGGGCA ATAATTCGAT CTGCCGAAGC CCTCGGTGCT CAAGGATTAA TCCTTCCACA AAGACGAAGT GCAGGATTAA CAGGATCCGT AGCAAAAGTT GCCGCTGGAG CTCTGGAACA TTTGCCTGTA GCAAGAGTTG TTAATTTAAA TAGGTCTTTG GAGAAATTGA AAGATGAAGG TTATACCGTT GTTGGCCTCG CTGAGGAGGG ATCATCTACT TTATCTGAAA TCAAATTTCA AGGTCCTTTA GTAGTAGTAG TTGGCTCTGA AGATAAAGGA ATTTCTCTAA TAACTAGAAG ATTATGTGAT CAGTTAGTAA GAATTCCTCT CAAGGGAGTC ACTACAAGCC TAAATGCATC AGTTGCTACG TCTATTTTCT TATATGAAGT TGCTAGATCC AAATGGATGC GCTCAATCTC TGGACAAGAC CCTTCTCCTA GATTATTGAA ACCTCAGATT TCATCTGAAA AGATTAACTA A
|
Protein sequence | MSYRFNKDTR NSKNSSSNKR SSNYSRQDND SKKSNFNDRR RTNNKINRHS SDQVNQYSLG KEFSDRSRSS NEANSNYRGS NRFERKSTNS SYRNQDSQET NNYRGSNRFE RKSTNPAYRN KNSQGASSYK REENNEPLSY SESFSKTLSD DLIWGRHSTE AALVGGRAIH RIWCTSELRS TPKFFQLLKD QKASGVLVEE VSWSRLGQLT NGAVHQGIVL QIAASKTLDL KNLIDACKAF GDSSLLLALD GLTDPQNLGA IIRSAEALGA QGLILPQRRS AGLTGSVAKV AAGALEHLPV ARVVNLNRSL EKLKDEGYTV VGLAEEGSST LSEIKFQGPL VVVVGSEDKG ISLITRRLCD QLVRIPLKGV TTSLNASVAT SIFLYEVARS KWMRSISGQD PSPRLLKPQI SSEKIN
|
| |