| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0258 |
|---|
| Symbol | trpD |
|---|
| ID | 3605630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 801361 |
|---|
| End bp | 802398 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637687116 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_291453 |
|---|
| Protein GI | 72382098 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT TAAATCCTAT AACTTTTCCA GTAATTCTTG AATCACTTCT TGCTTCCAAT
GATTTAACTG AAGAGCAATC TAATTATTTA ATGAATTCAT GGCTCGATAA TAAAATTGAA
CCAGTTCAAA CGGGGGCATT TCTAGCAGCA TTTAGAGCAA AGGGTGTTTC TGGTGATGAA
CTTTCGGCAA TGGCAAAAAT TCTTCAAGAT GCCTCAACGA CTCCATCAGA TCTACCATCT
TTTGATTTGG TTGATACATG TGGAACTGGC GGAGATGGAG CGAACACTTT TAATATTTCT
ACAGGAGTTG CCTTCGTATC AGCGGCTTTA GGGGTGAAAA TTGCTAAACA TGGAAATCGA
AGTGCAAGTG GCAAGGTTGG ATCAGCTGAC GTATTAGAAA ATTTAGGATT ACCTTTAAAT
GTTTCCTCCG GGAAAGTTGT TGAAGCTTTA AAGAAGTTAG GTATTACATT TCTTTTTGCT
CCTTCTTGGC ATCCTTCATT GGTAAATCTT GCTCCTTTAA GAAAAAGCTT AGGAGTCAGA
ACTATCTTCA ATTTACTGGG TCCATTGGTT AACCCACTTA GACCAAAGTC TCAAGTATTG
GGAGTAGCCA AAGCTGATTT GCTTGATCCA ATGTCAGTAG CTTTAAAAGG AATGGGACTT
AAAAGAGCTG TTGTGGTTCA TGGAGCAGGA GGCCTTGATG AGGCTTCACT TGCTGGTGCT
AATCAATTTA GGTTCTTAGA TAAAGATGTT ATTAGATCTG AAATTATTAG CCCTGGTGAT
CTTGGACTTA CTCAAATCTC TAATGAATCC TTAAAAGGTG ATGGTTTGAA AACTAATTCT
CATATCTTAA AGTCTTTACT TAATGGAGAA GGAAATCAAT ATCACAAAGA AGTCATAGCA
TTAAATACTG CTCTGGTTTT ATGGGTATCA GGAACTGAGG ATGATTTATC TTCAGGTGTC
AAACGAGCAT TAGATTGTTT GGATACAGAT AAATCATGGC TCCTTTTCGA GCAATTAAGA
GACTTTTTAG CCACTTAA
|
|---|
| Protein sequence | MTILNPITFP VILESLLASN DLTEEQSNYL MNSWLDNKIE PVQTGAFLAA FRAKGVSGDE
LSAMAKILQD ASTTPSDLPS FDLVDTCGTG GDGANTFNIS TGVAFVSAAL GVKIAKHGNR
SASGKVGSAD VLENLGLPLN VSSGKVVEAL KKLGITFLFA PSWHPSLVNL APLRKSLGVR
TIFNLLGPLV NPLRPKSQVL GVAKADLLDP MSVALKGMGL KRAVVVHGAG GLDEASLAGA
NQFRFLDKDV IRSEIISPGD LGLTQISNES LKGDGLKTNS HILKSLLNGE GNQYHKEVIA
LNTALVLWVS GTEDDLSSGV KRALDCLDTD KSWLLFEQLR DFLAT
|
|---|
| |