Gene PMN2A_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0256 
Symbol 
ID3605628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp799111 
End bp800862 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content36% 
IMG OID637687114 
Productmultidrug ABC transporter 
Protein accessionYP_291451 
Protein GI72382096 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.607826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAT TAAGACTAGA TCTAATAAAA AACTATTTGA GACCACACAA GAGGGAACTA 
ATAATAGGTG CTTTCTGTCT GATTTTTGTA AATATTCTAA GCGTTGCTAT TCCTATGGAA
GTGAGAAATA TAGTTGATGA TCTAAAAGAA GGATTTACAT TTTCATACGT CTTAAATAAG
TCGACATGGT TAATACTCAT GGCGACAGTA ATGGGGGGAG CAAGATTGAT ATCTCGGCAA
CTCGTGTTTG GGGTTGGCAG ACAAGTAGAA GTTTCATTGA GACAAAAATT ATTTGATCGA
ATGCTGGAAC AGGATCCCGG CTGGGTTCAA ACAATAGGGA CTGGAGAAGT CATAACAAGA
GCAACTAGCG ATTTGGAAAA CATTCGAAGA TTGCTTGGTT TTACGGTTCT TAGTCTTACA
AACACATTAT TGGCATACAC CTTCACATTG CCAGCAATGC TGACAATTAA TCCGCTTTTA
ACCTTTTTTG CTATTTCCGT CTATCCAGTT TTATTTGGCA CCGTTGGATT GTTCGGAGGA
AGAATGGTTA AACAAAGAAA GAGGCAACAA CAAGCTTTAT CCGAACTAAG TGAACTAATT
CAAGAAGATC TATCTGGCAT TAGTGCCATT AAGATTTATG GTCAAGAACG AGCTGAGCAA
GAAGCTTTCA AGAAATTAAA TATCAGATAC AGAGACGCTG CTATTAACCT TGCAAGAACT
GCAAGTACTT TATTTCCACT ACTTCAAGGT TTATCCTCAA TTTCATTGCT TCTACTTATT
GCAATTGGTA GTGGGCAACT AAGCAGTGGA ACTCTTACGG TTGGAGGCTT AGTAGCTTTA
ATTCTTTATG TAGAAAGACT AGTTTTCCCT ACAGCCTTAT TAGGTTTTAC ACTTAATACT
TTTCAATTGG GTCAAGTAAG TTTAGAGAGA GTAGAAGAAC TTCTTAATCA TGAACCTACA
ATCAAAGATA AAGATAATAC TGTAAATATA ACTAAACCTA TTTCAGGAAA ATTAGAAGCA
AAAAATCTTT CAGTAAGTTA TGAAGATTCA CCAAGGAAAA TACTAGATGA AATTTCATTC
AAAATAACCC CCGGAGAAAT AGTCGCCTTA GTAGGACCTG TAGGGTGCGG TAAAACAACC
TTGGCAAGAG CTTTAGGAAG GATAATAAAA ATTGATGAAG GATGTTTGTA TTTAGACGAT
AATGATGTCA TGAACCTAAA ACTGAATCAG TTAAGAAGCA ATATCGCTTT AGTACCTCAA
GAGGGATATC TTTTTACAGA AACACTTTCA GAAAACATTA AATACGGGAA TCCAGAAGCG
TCCACAGAGA AAGTCCAAGA ATCAGCCTAT GAAGCGAGAA TGACAGATGA CATAAAAGGT
TTTCCTGATG GACTTAAAAC ACTTGTCGGT GAAAGAGGAA TAACTCTAAG CGGTGGACAA
AGACAACGAA CTGCTTTAAG TCGAGCTTTA TTAGTAGATT CAAAGATAAT TGTTCTTGAT
GATGCCTTAG CAAGTGTGGA CAATAAAACC GCGTCAGCAA TACTTCAAAC AATAAAAAAA
CAATATAGTA AAACAGTATT AATGATTAGT CATCAACTTT CAGCTGCTGC TGCGTGTGAT
CGAATATTGG TAATGAATGA TGGAAAAATT GTACAAGAGG GAACTCATCA ATTCTTAATT
AAGAAAGATG GTTTGTATAA AAGCATGTGG GAGAGAGAAA AAGCCAAAGA ACAAATTCAA
TCAGATGATT AA
 
Protein sequence
MAALRLDLIK NYLRPHKREL IIGAFCLIFV NILSVAIPME VRNIVDDLKE GFTFSYVLNK 
STWLILMATV MGGARLISRQ LVFGVGRQVE VSLRQKLFDR MLEQDPGWVQ TIGTGEVITR
ATSDLENIRR LLGFTVLSLT NTLLAYTFTL PAMLTINPLL TFFAISVYPV LFGTVGLFGG
RMVKQRKRQQ QALSELSELI QEDLSGISAI KIYGQERAEQ EAFKKLNIRY RDAAINLART
ASTLFPLLQG LSSISLLLLI AIGSGQLSSG TLTVGGLVAL ILYVERLVFP TALLGFTLNT
FQLGQVSLER VEELLNHEPT IKDKDNTVNI TKPISGKLEA KNLSVSYEDS PRKILDEISF
KITPGEIVAL VGPVGCGKTT LARALGRIIK IDEGCLYLDD NDVMNLKLNQ LRSNIALVPQ
EGYLFTETLS ENIKYGNPEA STEKVQESAY EARMTDDIKG FPDGLKTLVG ERGITLSGGQ
RQRTALSRAL LVDSKIIVLD DALASVDNKT ASAILQTIKK QYSKTVLMIS HQLSAAAACD
RILVMNDGKI VQEGTHQFLI KKDGLYKSMW EREKAKEQIQ SDD