Gene PMN2A_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0204 
Symbol 
ID3605574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp756362 
End bp757132 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content36% 
IMG OID637687060 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_291399 
Protein GI72382044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.317443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA TACCTGCAAT AGATCTACTG AATGGTAAAT GTGTTCGACT AAATCAGGGA 
AATTATAATG AAGTTACTAA GTTCAATAGT GATCCTGTAA AACAAGCGGA AATTTGGGAA
AGCAAGGGAG CAAAACGACT ACATCTTGTA GATCTTGATG GTGCCAAGAC AGGTGAGCCC
ATAAATGATC TAACTATAAA AGAGATAAAA AAATCTATTA CAATACCTAT TCAACTTGGC
GGTGGAATTA GGAGTATTGA TCGTGCGAAA GAATTATTCG ACATTGGAAT AGACAGAATT
ATTTTAGGAA CAATTGCAAT AGAGAAGCCC GAATTAGTTA AAGACCTATC TAAAGAATAT
CCAAAAAGAA TTGCAGTAGG AATTGATGCC AAAGAGGGAA TGGTAGCCAC TCGAGGTTGG
TTAAAACAAA GCGAAATATC TTCTCTAGAC TTAGCAAAAC AACTTAACGA TCTTGACTTA
GCGGCAATCA TATCAACTGA CATTGCTACC GATGGCACTC TAAAAGGACC TAATGTTCAA
GCCTTAAGAG AAATAGCTGA GATAAGTATT AATCCAGTAA TTGCCTCAGG GGGGATAGGT
TCAATAGCTG ATTTAATTTC ACTAGCAGAT TTCGCGGATG AAGGTATTGA AGGAATAATC
GTAGGCAGAG CACTATATGA CGGCTCAATA GATTTAAAGG AAGCGATTTT AACTCTAAAA
AATCTTCTTC TGCAAGATGC TTTCAATGAG AAAGATAAAT TTCTTGTCTA A
 
Protein sequence
MEIIPAIDLL NGKCVRLNQG NYNEVTKFNS DPVKQAEIWE SKGAKRLHLV DLDGAKTGEP 
INDLTIKEIK KSITIPIQLG GGIRSIDRAK ELFDIGIDRI ILGTIAIEKP ELVKDLSKEY
PKRIAVGIDA KEGMVATRGW LKQSEISSLD LAKQLNDLDL AAIISTDIAT DGTLKGPNVQ
ALREIAEISI NPVIASGGIG SIADLISLAD FADEGIEGII VGRALYDGSI DLKEAILTLK
NLLLQDAFNE KDKFLV