Gene PMN2A_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0194 
Symbol 
ID3605564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp746909 
End bp747988 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content37% 
IMG OID637687050 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_291389 
Protein GI72382034 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.18652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTT ACAAAATAAC ATTATTGCCA GGAGATGGAA TTGGTCCAGA GATAACAAAC 
GTCACTCATA AAATCCTTGA CCTAGTCTCA AGGAAATTTG GCTTTGAAAT CAAATTTAAA 
GAAATGCCTT TCGGGGGATC AGCAATAGAT TCAGATGGTA TCCCCTTCCC AGATAGAACT 
CTTCAAGAAT GTAAGAACTC TGATGCTGTT TTGTTAGCGG CAATAGGAGA CCCAAAGTAT 
GACGAATTAC CTAGAGAGAA AAGGCCTGAG ACAGGCCTAC TCAATCTCCG ATCTTCTTTG 
GATCTTTTTG CAAATATAAG GCCAGTAAAA ATAATTCCAT CCTTAACAAA AGCAAGTAGT 
TTGAAAGAAG ACTTTGTTAA AGAAGTTGAT TTAGTAGTAG TTAGAGAACT TACCAGCGGT 
ATTTACTTTG GAGAACCAAA AGGAAGGATA AAAACAGATA AAGGAGAAAG GGCATTTAAC 
ACGATGACAT ACACCTCCGA GGAAGTGAAT CGAATAGCAG AAATTGCTTT TAAATTAGCC 
AAACAAAGAA ATCAAAAAGT TTGCTCAGTT GATAAAGCTA ATGTTTTAGA TGTAAGTCAA 
CTATGGAGAG AGGAAACAAT ATTGGTGTCT AACAAATACA AAGATATAGA ACTTACGCAT 
CAATATGTAG ACAATGCAGC AATGCAACTT GTTAGAAATC CAAGCCAATT TGATGTGATT 
CTTACAGGTA ATTTATTTGG AGATATTCTT AGCGACATTG CAGCCATGCT GACAGGATCA 
ATTGGCATGC TTCCTTCTGC TTCGTTAACC ACTGATGGGC CAGGTGTCTT TGAACCTGTT 
CATGGCTCAG CTCCTGACAT CGCAGGAAAA GATATAGCTA ATCCAATAGC AATGCTCTTA 
TCTGCTGCAA TGATGTTAAA AATTGCCCTT AATGAAACAG AAGCGGCAAC TTTTTTAGAA 
AATGCAATTA ACGAAATTCT TAATGACGGT TATAGAACTT CTGACTTAAT GAGCATTCAG 
ACGACTAAAC AGGTTGGTTG CTCTCAAATG GGTGAACTAT TGGCGGAAAA ATTAAAATAA
 
Protein sequence
MKSYKITLLP GDGIGPEITN VTHKILDLVS RKFGFEIKFK EMPFGGSAID SDGIPFPDRT 
LQECKNSDAV LLAAIGDPKY DELPREKRPE TGLLNLRSSL DLFANIRPVK IIPSLTKASS 
LKEDFVKEVD LVVVRELTSG IYFGEPKGRI KTDKGERAFN TMTYTSEEVN RIAEIAFKLA 
KQRNQKVCSV DKANVLDVSQ LWREETILVS NKYKDIELTH QYVDNAAMQL VRNPSQFDVI 
LTGNLFGDIL SDIAAMLTGS IGMLPSASLT TDGPGVFEPV HGSAPDIAGK DIANPIAMLL 
SAAMMLKIAL NETEAATFLE NAINEILNDG YRTSDLMSIQ TTKQVGCSQM GELLAEKLK