Gene PMN2A_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0170 
Symbol 
ID3605540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp725771 
End bp726958 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content31% 
IMG OID637687026 
Productputative permease 
Protein accessionYP_291365 
Protein GI72382010 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.736703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AACAGTTATT TTTCTCTAGA TTTCAAAAAT TAGTAGAAAG TAAATGGAAA 
ATAATTCCAT TATTAGATAG ATGGATACTT TTTGAATTAT TGCCGCCTTT ATTTTTTTCA
ATAGCGGCTT TTACCGTCGT TTCTCTTTCA GTAGGAGTTA TTTTTGATCT GATTAGAAAA
ATAGTTGAGA TTGGTCTTCC ATTTTCTGTA GCTATTCAGA TTCTATTGCT AAAGCTACCA
AGTTTTGTTG TTATTTCTTT CCCTATGGCA ATGTTACTTT CAACTTTGTT AGCGTATGGA
AGTCTTAATG ATAATAGTGA AATTAAGGCA TTAAAAAGTA TTGGTATATC AGTTTATAGA
CTTATTTTGC CAGGATTGAT TTTGTCAATA TTTATGTCAT ATATGACCTT CATTTTTAAT
AATAATATTG TTCCTAGTAC AAATAAAAAT GCCGAAATTA TCTTAGCTAA TTCTTTAGGT
AGATCTTTTG CAAATGAACA GGGAGAAGAT ATTATATTTT CAAAGAAAGG AGAAATCTTA
GATCCATATT CAAGCTATAA AAAAAACGGA GTTACGCATC TCTTTTATGC TTGGAAATTT
ATTGATGGGC AGATGTTGGA TGTCACAGTA ATTGATTTTT CAAAATTAGG TTTTACTCAA
ATGCTTAAGG CGAAAAAAGG TATTTGGAAT AGTGACAAAA ACAATTGGGA GTTTTTTGAA
GGAGATATTT TGACGCTTAG TCCTGATGGA AGTAATACAA GAACTAAATT CTTGAGTTTT
TTATATCCTT TAGGGACTGA ACTTACTAAT ATTGCACAAC TGCCAAAAGA TGCAAATGAT
ATGAATCTTG GAGAAGCGAA TACGGCTATG AAGTTATATC AAAGTAGTGG CAATATTAAA
GAAGCAAGAA GGATGAAAGT AAGAATTCAA GAAAAAATTA CTTTACCAAT CGCTTGTTCG
GTTTTTGCTT TAATTGGTTG TAGTTTCGGT GTGATGCAAA AAAGAGGAGG AGGTAGAAGT
CAAAGTTTTG GATTAAGTAT TATTTTGATA CTTATCTATT ACATTTTGAG CTTTAGTTTT
AGCTCTCTTG GGGTCAAAGG AATAATAAAT CCTTTCTTTG CTGCTTGGTC TCCTGTTTTT
TTGTCTATGT TAGGGGGAGG TTTTTTGTTA AAACAGGCAA GCAAATGA
 
Protein sequence
MYKKQLFFSR FQKLVESKWK IIPLLDRWIL FELLPPLFFS IAAFTVVSLS VGVIFDLIRK 
IVEIGLPFSV AIQILLLKLP SFVVISFPMA MLLSTLLAYG SLNDNSEIKA LKSIGISVYR
LILPGLILSI FMSYMTFIFN NNIVPSTNKN AEIILANSLG RSFANEQGED IIFSKKGEIL
DPYSSYKKNG VTHLFYAWKF IDGQMLDVTV IDFSKLGFTQ MLKAKKGIWN SDKNNWEFFE
GDILTLSPDG SNTRTKFLSF LYPLGTELTN IAQLPKDAND MNLGEANTAM KLYQSSGNIK
EARRMKVRIQ EKITLPIACS VFALIGCSFG VMQKRGGGRS QSFGLSIILI LIYYILSFSF
SSLGVKGIIN PFFAAWSPVF LSMLGGGFLL KQASK