Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0166 |
Symbol | |
ID | 3605536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 721063 |
End bp | 722859 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637687022 |
Product | GTP-binding protein TypA |
Protein accession | YP_291361 |
Protein GI | 72382006 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0168881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTG ATATACAAGC TATTAGGAAT ATCGCAATAA TTGCTCACGT TGATCATGGT AAGACAACTT TGGTTGATGC TCTTTTAAAT CAATCTGGCA CTTTTCGAGA TAACGAAGAA GTCCCAACTT GTGCGTTGGA TTCGAATGAA TTGGAACGTG AAAGAGGTAT AACAATTCTT TCGAAAAACA CAGCTGTTAC TTATAACGAT ACTCGGATAA ACATTGTTGA TACACCAGGG CACGCTGATT TTGGAGGAGA AGTTGAGAGG GTTTTGGGAA TGGTAGATGG CTGTCTTCTT GTTGTTGATG CTAACGAGGG ACCAATGCCA CAAACTCGAT TTGTTCTGAA AAAAGCTTTA GAGCAAGGCT TAAGACCTAT TGTGTTTGTG AATAAAATTG ATCGTGCAAG GGTAGAACCA GAAACCGCGG TAGACAAAGT TTTAGATCTG TTTTTGGAGT TAGGCGCTGA TGATGATCAA TGTGATTTTC CTTATCTATT TGGGAGTGGA TTAGGGGGGT TTGCCAAGAC TGAAGTAAAA AGTGAAAACG ATAATATGAA ACCTTTATTT GAAGCAATTA TTAGACAAGT TCCTCCTCCA GTTGGCGACG TGAAAAAGCC TTTACAATTA CAAGTCACCA CCCTAGATTA CTCAGATTTC TTAGGAACAA TTATTATCGG TAGAGTACAT AATGGTGTAA TTAAAAACGG CCAAAGGACT TGTTTGATAA AGGAAGATGG GAGTTTGAAA AAAGGAAGGA TTAATAAATT ATTAGGATTT AAGGGATTAA AAAGAATTGA AATAGAAGAA GCAAATGCTG GAGATATAGT CGCCTTAGCT GGTTTTGATG AGGTTTCTAT TGGTGAAACT GTAGCCTGCC CTGATGAGCC GAAACCTTTA CCTCTAATCA AGGTTGATGA GCCAACCTTG CAGATGACTT TTGTTGTTAA TGATTCTCCT TTTGCGGGGA AAGAGGGCAA GTTCGTAACT AGCCGGCAGT TGAAGGATCG TTTAAATAAA GAACTTCTAA CGAATGTTGC TTTAAGAGTT GAAGACACAG ATTCTCCTGA CCGTTTTTCT GTTAGTGGAA GGGGAGAGTT ACATCTAGGA ATTCTTATAG AGACAATGAG AAGAGAGGGG TATGAATTTC AAGTTTCTCA ACCACAAGTA ATTTTCAGGA CAATAGATGA AATTAAATGT GAACCTGTTG AAACACTTGT CCTTGATGTC CCTGAAGCTT CTATTGGTGC TTGTATTGAG AGCCTTGGGG TAAGAAAAGG TGAAATGCAA AATATGGAAA CTGGTACTGA TCATCGAACT CAGCTTGAGT TTGTTATCCC CTCAAGAGGC TTGATTGGAT TTAGGGGTGA ATTTATTCGT GCAACAAGAG GTGAAGGGAT TATGAGCCAT TCATTTTTTG AATACAGGCC ATCTGTAGGA GATTTTGAGC AAAGGAGAAA TGGAGTCCTT ATCTCATTTG AAGAAGGTGT CGCTACTTTC TATTCCTTAA AGAATGCAGA AGACCGTGGA CAATTTTTTA TTACTCCTGG AGCCAAGGTT TATAAAGGAA TGATTATTGG GGAGAATAAA CGCCCACAAG ATCTTGAATT AAATATTTGC AGGGCTAAAC AACTTACCAA TATGCGATCA GCTGGTGCAG ATGAGCTAGA TCAATTGCAA TCCCCAATTG AAATGACATT AGAAAGAGCT CTTGAATACA TTGGACCAGG AGAGATGTTG GAAGTTACTC CTGAATCTAT AAGGCTTAGA AAACTTAAAG CAAAGAAAAA TTTGTAA
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Protein sequence | MSFDIQAIRN IAIIAHVDHG KTTLVDALLN QSGTFRDNEE VPTCALDSNE LERERGITIL SKNTAVTYND TRINIVDTPG HADFGGEVER VLGMVDGCLL VVDANEGPMP QTRFVLKKAL EQGLRPIVFV NKIDRARVEP ETAVDKVLDL FLELGADDDQ CDFPYLFGSG LGGFAKTEVK SENDNMKPLF EAIIRQVPPP VGDVKKPLQL QVTTLDYSDF LGTIIIGRVH NGVIKNGQRT CLIKEDGSLK KGRINKLLGF KGLKRIEIEE ANAGDIVALA GFDEVSIGET VACPDEPKPL PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQLKDRLNK ELLTNVALRV EDTDSPDRFS VSGRGELHLG ILIETMRREG YEFQVSQPQV IFRTIDEIKC EPVETLVLDV PEASIGACIE SLGVRKGEMQ NMETGTDHRT QLEFVIPSRG LIGFRGEFIR ATRGEGIMSH SFFEYRPSVG DFEQRRNGVL ISFEEGVATF YSLKNAEDRG QFFITPGAKV YKGMIIGENK RPQDLELNIC RAKQLTNMRS AGADELDQLQ SPIEMTLERA LEYIGPGEML EVTPESIRLR KLKAKKNL
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