Gene PMN2A_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0163 
Symbol 
ID3605533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp716570 
End bp718732 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content35% 
IMG OID637687019 
Productglycyl-tRNA synthetase, beta subunit 
Protein accessionYP_291358 
Protein GI72382003 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTACCT ACCTTTTAGA AATCGGTACT GAGGAACTAC CAGCTGATTT GGCTGAATCT 
GTTATTTCCC AGCTTGAGTT AAGTGTAAAT AATGACTTGA ATTCTGCTCA AATAAAATTT
AGTGAGATAA GTGTAACTAC TACCCCCAGA AGAATTGCAT TGACGATTGA AGGGATTGCT
CCATTTTCTG AAGACAATAT TGCAGAACGA AAAGGTCCTC CTGTTTCTCA AGCTTTTCAT
GATGGAAAAC CTACAAAAGC AGCAATTGGT TTTGCTAAAA GATATGAACT ATCTCCTGAA
AAATTAGAGA TTCGTGAAAC CTCGAAGGGT TCATTCGTTT TTGCTAAATC AATTGAGAAA
GGCAAGCCAG TTACTACTGT ATTGTCTGAC TATTTACCTA GATGGATCAG CAAGATTCAA
GGAAGGAGGT TTATGAGATG GGGCAAAGGT GATTTTCGCT TTTCGAGACC TATTCGTTGG
ATTGTTTCTT TGCTTGATTC AGAAGTTCTA CCTTTTAAAA TTTCAGGGTG TGATCCAGAA
ATACAAATAG GTAATATCTC AAGACCTCAT AGGTTGTATG GAACAAAATT AGAAATAAAT
GATGCGAAAA CTTATTTTGA TCAATTGCAA GATGTGGGAG TCACAGTTGA TAGGGATCGT
CGCCTTTCCT GTATCAATGA TTTAGTTCTT AATCACGAAA TAGATAAAAA AGTTAAGCCA
GATCTAACTG ATCCCCTTTT AAATGAACTG ACAGATTTAA TTGAGTCTCC TTTACTTGTG
ACTGGGTGTT TTGATGAATC TTTTCTTGAG TTACCCCCTG AAGTTTTGTC CACTGTGATG
AAGGTTCATC AAAGGTACAT CCCCTTATAC AAAGTGAATG TTGAGTTTGA TCCATTATCA
CTTAACTCTA AAAATACTTT ACTTCCTACT TTTTTGTGTA TTAGTAATGG ATTACCTTCA
GCAAAAGAGA AAATTATTAA AGGAAATGAA AAAGTCTTAA AGGCAAGGTT TGCTGATGCT
TCATTTTTCA TAAAGTCAGA TTTATTAATC AGTAGCTCTT CACGTATTGA TAAGTTGAAA
GATGTAACTT TTGCTGAAGG ATTAGGTTCT TTATATGAGC GTGTAAATCG AATTGAATGG
CTTGTTAAAT TATTAACACT AAAACTTGAA TTTGATCAAG AGGATATTCA AAAATCTGTA
AAAGTTGCAC ATTTCTCTAA ACATGATTTA GTTAGTAACA TGGTTGATGA ATTTCCAGAG
TTGCAAGGAA TCATTGGATC TAAATACTTA CTTCACGAGG GAGAATCAAG AGATGTATGC
CTTGGTGTTT TGGAACATTA CAAACCTAAA GGTACTTCTG ACTCGCTTCC TTCAAATAAC
CTTGGGAATG CGGTTTCATT AGCGGAACGT TTTGAATTGC TTATCAGCAT TTATGCCAAG
GGCGAAAGGC CTTCTGGCTC ATCTGATCCA TATGCCTTGA GAAGGGCTGC TAATGGAATA
TTATTGATTT TGTGGAACAA AGATTGGCAA TTAAATATTA ACAAAATACT AGATGATTCA
CTGATTTATT GGCAGCAACT TTTTCCTTCT CTCTCTCTTG ATATTAGTAA TCTTTTGTCC
GATTTAAAGG AATTCTTTCG TCAAAGAATT ATTAGTTTAT TAGAAGAGAA AGATGTTGAA
TTTGATATCA TTCAGGCAGT TGCAGGAGAT ACCACTTCAA CATCAAAATT ATTAGATGAT
CCAACAGACG TCTATTTTCG AACTTCATTA TTGATGGAAA TGAGAAAAAA TAATACACTT
AATTTGTTGC AAGCTGTAGT GACTCGAGCC TCTAGGTTGG CAGCTAAAAG TTCTATCTCC
AAAGATGTTA TTGATCCTTT AGATTTTGTT GATAGGTCTC TATTTGAAAA GGATTGTGAA
AGAGAAATGT TTGATGTGTT GGAGAAGTTA AAACCTCTAG CTGTAAATTG TGATCGTGAT
AAATATAAGT TGTTAGCTGA TGGGCTAGTC TCAAGTACTG AAACTTTATC CAACTTTTTT
GATGGAGAAG GAAGTGTAAT GGTTATGACG GAAGATATTA ATCTACGAAA TAATAGACTT
AATCTATTGA CGTTACTTAG GAATCAATCT TTAAAGCTTG CTGATTTCAG CAAGCTTGGT
TAA
 
Protein sequence
MSTYLLEIGT EELPADLAES VISQLELSVN NDLNSAQIKF SEISVTTTPR RIALTIEGIA 
PFSEDNIAER KGPPVSQAFH DGKPTKAAIG FAKRYELSPE KLEIRETSKG SFVFAKSIEK
GKPVTTVLSD YLPRWISKIQ GRRFMRWGKG DFRFSRPIRW IVSLLDSEVL PFKISGCDPE
IQIGNISRPH RLYGTKLEIN DAKTYFDQLQ DVGVTVDRDR RLSCINDLVL NHEIDKKVKP
DLTDPLLNEL TDLIESPLLV TGCFDESFLE LPPEVLSTVM KVHQRYIPLY KVNVEFDPLS
LNSKNTLLPT FLCISNGLPS AKEKIIKGNE KVLKARFADA SFFIKSDLLI SSSSRIDKLK
DVTFAEGLGS LYERVNRIEW LVKLLTLKLE FDQEDIQKSV KVAHFSKHDL VSNMVDEFPE
LQGIIGSKYL LHEGESRDVC LGVLEHYKPK GTSDSLPSNN LGNAVSLAER FELLISIYAK
GERPSGSSDP YALRRAANGI LLILWNKDWQ LNINKILDDS LIYWQQLFPS LSLDISNLLS
DLKEFFRQRI ISLLEEKDVE FDIIQAVAGD TTSTSKLLDD PTDVYFRTSL LMEMRKNNTL
NLLQAVVTRA SRLAAKSSIS KDVIDPLDFV DRSLFEKDCE REMFDVLEKL KPLAVNCDRD
KYKLLADGLV SSTETLSNFF DGEGSVMVMT EDINLRNNRL NLLTLLRNQS LKLADFSKLG