Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0157 |
Symbol | rpsB |
ID | 3605527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 708325 |
End bp | 709017 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637687013 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_291352 |
Protein GI | 161347557 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGTAG TTTCTCTCTC AGAGATGATG GAAGCTGGTG CTCACTTTGG GCATCAGACA AGAAGATGGA ATCCCAAGAT GTCCCGTTAC ATCTATTCTG CTCGTAATGG GGTTCATATT ATTGATCTCG TTAAAACGGC TGTTTGTATG AACAGCGCCT ATAAATGGAC AAGAGGAGCC GCAAGAAGCG GTAAAAGATT CCTTTTTGTA GGTACCAAAA AACAAGCTTC CGAGGTAGTT GCTCAAGAAG CTATTAGATG CGGAGCTTCA TACGTCAATC AAAGATGGTT AGGAGGTATG CTTACAAATT GGACAACAAT GAAAGCAAGA ATTGACAGGC TAAAAGATCT TGAACGAATG GAATCGAGTG GTGCTATTGC AATGCGCCCC AAAAAGGAAG GAGCCGTATT ACGTAGAGAA TTAGAACGAT TGCAAAAATA CCTAGGTGGA CTTAAAGGCA TGAGACGTCT TCCTGATGTT GTTGTTTTAG TTGATCAAAG GCGAGAAACA AACGCTGTTT TAGAGGCCAG AAAACTCGAT ATTCCATTGG TGTCAATGCT TGATACTAAT TGTGATCCAG ATCTTTGCGA GATTCCAATA CCATGTAATG ACGATGCTGT TCGATCTGTT CAACTCGTTT TGGGTAGATT AGCTGACGCT ATCAATGAAG GGAGACATGG ACCCAATGAG TAG
|
Protein sequence | MAVVSLSEMM EAGAHFGHQT RRWNPKMSRY IYSARNGVHI IDLVKTAVCM NSAYKWTRGA ARSGKRFLFV GTKKQASEVV AQEAIRCGAS YVNQRWLGGM LTNWTTMKAR IDRLKDLERM ESSGAIAMRP KKEGAVLRRE LERLQKYLGG LKGMRRLPDV VVLVDQRRET NAVLEARKLD IPLVSMLDTN CDPDLCEIPI PCNDDAVRSV QLVLGRLADA INEGRHGPNE
|
| |