Gene PMN2A_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0157 
SymbolrpsB 
ID3605527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp708325 
End bp709017 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID637687013 
Product30S ribosomal protein S2 
Protein accessionYP_291352 
Protein GI161347557 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG TTTCTCTCTC AGAGATGATG GAAGCTGGTG CTCACTTTGG GCATCAGACA 
AGAAGATGGA ATCCCAAGAT GTCCCGTTAC ATCTATTCTG CTCGTAATGG GGTTCATATT
ATTGATCTCG TTAAAACGGC TGTTTGTATG AACAGCGCCT ATAAATGGAC AAGAGGAGCC
GCAAGAAGCG GTAAAAGATT CCTTTTTGTA GGTACCAAAA AACAAGCTTC CGAGGTAGTT
GCTCAAGAAG CTATTAGATG CGGAGCTTCA TACGTCAATC AAAGATGGTT AGGAGGTATG
CTTACAAATT GGACAACAAT GAAAGCAAGA ATTGACAGGC TAAAAGATCT TGAACGAATG
GAATCGAGTG GTGCTATTGC AATGCGCCCC AAAAAGGAAG GAGCCGTATT ACGTAGAGAA
TTAGAACGAT TGCAAAAATA CCTAGGTGGA CTTAAAGGCA TGAGACGTCT TCCTGATGTT
GTTGTTTTAG TTGATCAAAG GCGAGAAACA AACGCTGTTT TAGAGGCCAG AAAACTCGAT
ATTCCATTGG TGTCAATGCT TGATACTAAT TGTGATCCAG ATCTTTGCGA GATTCCAATA
CCATGTAATG ACGATGCTGT TCGATCTGTT CAACTCGTTT TGGGTAGATT AGCTGACGCT
ATCAATGAAG GGAGACATGG ACCCAATGAG TAG
 
Protein sequence
MAVVSLSEMM EAGAHFGHQT RRWNPKMSRY IYSARNGVHI IDLVKTAVCM NSAYKWTRGA 
ARSGKRFLFV GTKKQASEVV AQEAIRCGAS YVNQRWLGGM LTNWTTMKAR IDRLKDLERM
ESSGAIAMRP KKEGAVLRRE LERLQKYLGG LKGMRRLPDV VVLVDQRRET NAVLEARKLD
IPLVSMLDTN CDPDLCEIPI PCNDDAVRSV QLVLGRLADA INEGRHGPNE