Gene PMN2A_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0154 
Symbol 
ID3605524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp706279 
End bp706971 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID637687010 
ProductABC transporter ATP-binding protein 
Protein accessionYP_291349 
Protein GI72381994 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR02982] ABC exporter ATP-binding subunit, DevA family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TAAACAATAA AACTTTAGAT ATTTCTTCTT TGAATCATTG GTATGGGCAT 
GGAGAGATGA GAAGGCATGT TCTCCAGTCT GTCTCAATGG AAATTTCTCC TGGTGAGGTT
GTTTTGTTAA CGGGACCTTC CGGATGTGGA AAAACCACTC TTTTGACTTT GATTGGAGCT
CTTCGTAAGG TTCAAGATGG TGAACTTAAA GTATTTGGTA AACAACTTTT TGGAGCAAGC
AGAAAAACTA GACAGAATCT TAGAAAAAAT ATTGGAATGA TTTTTCAGGG GCATAATCTT
TTGAGATGTT TAACCGCTGA ACAAAATGTC CAAATGGGTG CAGACCTTTT AAATGGATTT
TCATACAAAG CTCGAAGGGC TCAGTCTAGA GAATGGCTTA GAGCTGTTGG ATTAGAAGAC
CACTTATCTA AGCTGCCGCA TGATTTATCA GGTGGGCAAA AACAGCGAGT TGCTATTGCC
AGAGCCCTTG CCGCTAGACC AAAATTACTT TTAGCGGATG AACCAACATC TGCATTAGAT
AGTTCAACTG GTAGAGAAAT TGTTGATTTG TTAAAAAAAC TAGCCTTAGA ACAATCCTGT
TCAGTGTTGA TGGTTACGCA TGATCCAAGA ATATTGGATG TGGCAGATCG TCTCTTGCAA
ATGGAAGATG GTCAAATATT GCCCTCTGTT TAG
 
Protein sequence
MKNINNKTLD ISSLNHWYGH GEMRRHVLQS VSMEISPGEV VLLTGPSGCG KTTLLTLIGA 
LRKVQDGELK VFGKQLFGAS RKTRQNLRKN IGMIFQGHNL LRCLTAEQNV QMGADLLNGF
SYKARRAQSR EWLRAVGLED HLSKLPHDLS GGQKQRVAIA RALAARPKLL LADEPTSALD
SSTGREIVDL LKKLALEQSC SVLMVTHDPR ILDVADRLLQ MEDGQILPSV