Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0154 |
Symbol | |
ID | 3605524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 706279 |
End bp | 706971 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687010 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_291349 |
Protein GI | 72381994 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TAAACAATAA AACTTTAGAT ATTTCTTCTT TGAATCATTG GTATGGGCAT GGAGAGATGA GAAGGCATGT TCTCCAGTCT GTCTCAATGG AAATTTCTCC TGGTGAGGTT GTTTTGTTAA CGGGACCTTC CGGATGTGGA AAAACCACTC TTTTGACTTT GATTGGAGCT CTTCGTAAGG TTCAAGATGG TGAACTTAAA GTATTTGGTA AACAACTTTT TGGAGCAAGC AGAAAAACTA GACAGAATCT TAGAAAAAAT ATTGGAATGA TTTTTCAGGG GCATAATCTT TTGAGATGTT TAACCGCTGA ACAAAATGTC CAAATGGGTG CAGACCTTTT AAATGGATTT TCATACAAAG CTCGAAGGGC TCAGTCTAGA GAATGGCTTA GAGCTGTTGG ATTAGAAGAC CACTTATCTA AGCTGCCGCA TGATTTATCA GGTGGGCAAA AACAGCGAGT TGCTATTGCC AGAGCCCTTG CCGCTAGACC AAAATTACTT TTAGCGGATG AACCAACATC TGCATTAGAT AGTTCAACTG GTAGAGAAAT TGTTGATTTG TTAAAAAAAC TAGCCTTAGA ACAATCCTGT TCAGTGTTGA TGGTTACGCA TGATCCAAGA ATATTGGATG TGGCAGATCG TCTCTTGCAA ATGGAAGATG GTCAAATATT GCCCTCTGTT TAG
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Protein sequence | MKNINNKTLD ISSLNHWYGH GEMRRHVLQS VSMEISPGEV VLLTGPSGCG KTTLLTLIGA LRKVQDGELK VFGKQLFGAS RKTRQNLRKN IGMIFQGHNL LRCLTAEQNV QMGADLLNGF SYKARRAQSR EWLRAVGLED HLSKLPHDLS GGQKQRVAIA RALAARPKLL LADEPTSALD SSTGREIVDL LKKLALEQSC SVLMVTHDPR ILDVADRLLQ MEDGQILPSV
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