Gene PMN2A_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0153 
Symbol 
ID3605523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp705070 
End bp706245 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content35% 
IMG OID637687009 
ProductABC transporter transmembrane protein 
Protein accessionYP_291348 
Protein GI72381993 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID[TIGR01185] DevC protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTAA AAAATATTTT TAAAAAAAGA AAAATACCTC TTGCTTGGCT TTTGCTGACA 
AGACAACCTT TAAGAATATT GGTAGCCATT GCAGGGATAG CATTTGCTGG AATCTTGATG
TTTATGCAAT TAGGTTTCAG AGATGGTTTG TTTGATGCGA GTGTTACTGT TCATAAGTTG
TTTGACGCAG ATTTGGTATT AATTAGTCCT CGCTCAAAAA GTTCAATAAG TATGAGTGGG
TTTCCTCGAC GAAGATTAGT TCAAGCAATG GCACATAAAG ATGTGACTGG AACAACTGCG
GTTAATTGGA ATTTTCTGCT TTGGCGAAAT CCTGAAAATT TATCAACTAG ATCAATTCTT
GCTTTAGGCT TTGAGCCAAG TAATCCATTG TTGATTGATT CTGATTTTGA GAGAAAGGCT
AAAACTTTAA AAAACAAAGG TAGGGTTTTA TTTGATGATC TTTCCAGAGA TGAATTCGGA
CCTATATCAC CATGGTTCAA ATCAGGACGT GTAGTTGAAA CTGAAGTCGC AGGTAAAAGA
GTTAGAGTTT CTGGGATAGT CAGTCTAGGT CCTTCCTTTG GCGCAGATGG GAATTTAATT
ACTAGCAGTG AGACATACTT AGAATTATCG CCAGGTAATC CTAAAGGAAG TATTGAAATT
GGTTTAGTAA GATTAGCGAA GGGATCTGAT ATTGAAAAAG TTGTTCGCTC TTTAAATATA
AGTTTGCCTA GTGACGTTAA GGTTATGTCT TTGAAATCAT TTATAGATTT TGAAAAAAAT
TATTGGAAAA GTAGTACATC CATTGGATTC ATTTTTACAT TGGGAGCAGC AATGGGATTT
ATTGTTGGTT GTGTAATTGT TTATCAAATT CTTTACAGTG ATGTCAGTGA TCATTTACCT
GAATATGCAA CCTTAATGGC TATGGGTTAC AACTTAAGAA CCCTATTAGG AGTTGTAGCT
AGAGAAGGAT TCATTTTATC AATAATGGGA TATATTCCTG CTTATCTTGC AGGACAAGCT
TTATATGCTT TGGTTAGATC TTCAACTAAA TTACCTGTTG AAATGAGTTT TAGTAGAGCA
TCAATTATAT TTTGCTTGAT ACTTTTTATG TGTATGGGAT CAGCATTAGC AGCTATGAAA
AAATTGGCAG ATGCTGATCC TGCTGAAATA TTTTGA
 
Protein sequence
MELKNIFKKR KIPLAWLLLT RQPLRILVAI AGIAFAGILM FMQLGFRDGL FDASVTVHKL 
FDADLVLISP RSKSSISMSG FPRRRLVQAM AHKDVTGTTA VNWNFLLWRN PENLSTRSIL
ALGFEPSNPL LIDSDFERKA KTLKNKGRVL FDDLSRDEFG PISPWFKSGR VVETEVAGKR
VRVSGIVSLG PSFGADGNLI TSSETYLELS PGNPKGSIEI GLVRLAKGSD IEKVVRSLNI
SLPSDVKVMS LKSFIDFEKN YWKSSTSIGF IFTLGAAMGF IVGCVIVYQI LYSDVSDHLP
EYATLMAMGY NLRTLLGVVA REGFILSIMG YIPAYLAGQA LYALVRSSTK LPVEMSFSRA
SIIFCLILFM CMGSALAAMK KLADADPAEI F