Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0153 |
Symbol | |
ID | 3605523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 705070 |
End bp | 706245 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637687009 |
Product | ABC transporter transmembrane protein |
Protein accession | YP_291348 |
Protein GI | 72381993 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR01185] DevC protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAATTAA AAAATATTTT TAAAAAAAGA AAAATACCTC TTGCTTGGCT TTTGCTGACA AGACAACCTT TAAGAATATT GGTAGCCATT GCAGGGATAG CATTTGCTGG AATCTTGATG TTTATGCAAT TAGGTTTCAG AGATGGTTTG TTTGATGCGA GTGTTACTGT TCATAAGTTG TTTGACGCAG ATTTGGTATT AATTAGTCCT CGCTCAAAAA GTTCAATAAG TATGAGTGGG TTTCCTCGAC GAAGATTAGT TCAAGCAATG GCACATAAAG ATGTGACTGG AACAACTGCG GTTAATTGGA ATTTTCTGCT TTGGCGAAAT CCTGAAAATT TATCAACTAG ATCAATTCTT GCTTTAGGCT TTGAGCCAAG TAATCCATTG TTGATTGATT CTGATTTTGA GAGAAAGGCT AAAACTTTAA AAAACAAAGG TAGGGTTTTA TTTGATGATC TTTCCAGAGA TGAATTCGGA CCTATATCAC CATGGTTCAA ATCAGGACGT GTAGTTGAAA CTGAAGTCGC AGGTAAAAGA GTTAGAGTTT CTGGGATAGT CAGTCTAGGT CCTTCCTTTG GCGCAGATGG GAATTTAATT ACTAGCAGTG AGACATACTT AGAATTATCG CCAGGTAATC CTAAAGGAAG TATTGAAATT GGTTTAGTAA GATTAGCGAA GGGATCTGAT ATTGAAAAAG TTGTTCGCTC TTTAAATATA AGTTTGCCTA GTGACGTTAA GGTTATGTCT TTGAAATCAT TTATAGATTT TGAAAAAAAT TATTGGAAAA GTAGTACATC CATTGGATTC ATTTTTACAT TGGGAGCAGC AATGGGATTT ATTGTTGGTT GTGTAATTGT TTATCAAATT CTTTACAGTG ATGTCAGTGA TCATTTACCT GAATATGCAA CCTTAATGGC TATGGGTTAC AACTTAAGAA CCCTATTAGG AGTTGTAGCT AGAGAAGGAT TCATTTTATC AATAATGGGA TATATTCCTG CTTATCTTGC AGGACAAGCT TTATATGCTT TGGTTAGATC TTCAACTAAA TTACCTGTTG AAATGAGTTT TAGTAGAGCA TCAATTATAT TTTGCTTGAT ACTTTTTATG TGTATGGGAT CAGCATTAGC AGCTATGAAA AAATTGGCAG ATGCTGATCC TGCTGAAATA TTTTGA
|
Protein sequence | MELKNIFKKR KIPLAWLLLT RQPLRILVAI AGIAFAGILM FMQLGFRDGL FDASVTVHKL FDADLVLISP RSKSSISMSG FPRRRLVQAM AHKDVTGTTA VNWNFLLWRN PENLSTRSIL ALGFEPSNPL LIDSDFERKA KTLKNKGRVL FDDLSRDEFG PISPWFKSGR VVETEVAGKR VRVSGIVSLG PSFGADGNLI TSSETYLELS PGNPKGSIEI GLVRLAKGSD IEKVVRSLNI SLPSDVKVMS LKSFIDFEKN YWKSSTSIGF IFTLGAAMGF IVGCVIVYQI LYSDVSDHLP EYATLMAMGY NLRTLLGVVA REGFILSIMG YIPAYLAGQA LYALVRSSTK LPVEMSFSRA SIIFCLILFM CMGSALAAMK KLADADPAEI F
|
| |