Gene PMN2A_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0117 
Symbol 
ID3605468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp672316 
End bp673461 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content37% 
IMG OID637686973 
Productphosphoribosylaminoimidazole carboxylase ATPase subunit 
Protein accessionYP_291312 
Protein GI72381957 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 
TIGRFAM ID[TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGG TCGTGGGTGG AGGACAGCTT GCAATGCTTT TGATTGAGGC TGGAAAGAAA 
AGAAATGTTG ATGTCGTTGT TCAGACGGCT GCTAAAACTG ATCCTGCTGC TAAAAAGACA
AAGCAACTCA TTTTGCATGA TCCTACGAAT CCCGTGGGTA CAAAACTTCT TGCAGAAAAG
ACCCGCTTGA TTACTTTTGA GAATGAATGG GTTGATATCT CAAGTTTACT TTCTCTTGAA
AATAATGGAG TTTCTTTTGT CCCTAGACTT CAATCAATAA GACCTTTAAT TAATAAAATA
ACTCAAAGAG AGCTATTAAA CAGTCTTGAT ATTCCCTGCC CTGATTGGTT GGCTATACCA
TTAAAAAAAT CAACAGAAAT TGATCTTCCT GCAGATTGGG GATTTCCTTT GATGGCAAAA
GCTGCCAAAG GTGGATATGA CGGGAAAGGA ACTAAAATTA TTAAAAATCT AAAGCAACTT
CAAGAATTTC TATCAGTTGA AAGAGAAGGG CAATGGATGT TAGAAAAATG GATCTCTTTT
GATAAGGAAT TATCCATCGT TTCTAGTAGG GATTCAAAAG GAATTGTCCG TAGTCTGCCA
ATCGTAGAGA CATATCAATC TAAACAAGTA TGTGACTGGG TCCTTGCTCC AGCTGATATT
AATCATGACG TTGATCTTAT GGTTAGAAAT ATCGCAGCCT CGTTGCTTGC TGAGTTGCAA
TATGTTGGAG TTATTGCTAT TGAATTTTTC TATGGATCTG AAGGATTACT TGTAAATGAA
ATAGCTCCAA GAACTCATAA CTCAGGTCAT TTTTCTATTG ATGCTTGTAG CAGCAGTCAG
TTTGATCAAC AAATATGTAT CACCTCTGGT ATTAATGTAC CTATGCCTGA AATGCTTGTT
AATGGTGCTT TAATGGCAAA CTTGCTTGGT TTGCAAAGTA ACTATCCAAT ATCACTTACC
CAAAGATTGG ATAATTTGAG GGGTATTCCT GGCTTGAATG TTCATTGGTA TGAAAAAGAG
GAAGAAAAAA AGGGCAGGAA GCTCGGTCAC GTCACATATC TCTTGAATAA TAAGGACGCT
TTGTCTAGAA AAAAAGAAGC ATTAGATGTT TTACAAACCA TACGGTCAAT TTGGCCGACC
TCTTGA
 
Protein sequence
MIGVVGGGQL AMLLIEAGKK RNVDVVVQTA AKTDPAAKKT KQLILHDPTN PVGTKLLAEK 
TRLITFENEW VDISSLLSLE NNGVSFVPRL QSIRPLINKI TQRELLNSLD IPCPDWLAIP
LKKSTEIDLP ADWGFPLMAK AAKGGYDGKG TKIIKNLKQL QEFLSVEREG QWMLEKWISF
DKELSIVSSR DSKGIVRSLP IVETYQSKQV CDWVLAPADI NHDVDLMVRN IAASLLAELQ
YVGVIAIEFF YGSEGLLVNE IAPRTHNSGH FSIDACSSSQ FDQQICITSG INVPMPEMLV
NGALMANLLG LQSNYPISLT QRLDNLRGIP GLNVHWYEKE EEKKGRKLGH VTYLLNNKDA
LSRKKEALDV LQTIRSIWPT S